7df6e18265341f87a69fba808aa1f92f8ebca841 markd Wed Apr 15 13:39:42 2026 -0700 move copy of htslib diff --git src/htslib/cram/rANS_static.h src/htslib/cram/rANS_static.h deleted file mode 100644 index 11f20b80304..00000000000 --- src/htslib/cram/rANS_static.h +++ /dev/null @@ -1,51 +0,0 @@ -/* - * Copyright (c) 2014 Genome Research Ltd. - * Author(s): James Bonfield - * - * Redistribution and use in source and binary forms, with or without - * modification, are permitted provided that the following conditions are met: - * - * 1. Redistributions of source code must retain the above copyright notice, - * this list of conditions and the following disclaimer. - * - * 2. Redistributions in binary form must reproduce the above - * copyright notice, this list of conditions and the following - * disclaimer in the documentation and/or other materials provided - * with the distribution. - * - * 3. Neither the names Genome Research Ltd and Wellcome Trust Sanger - * Institute nor the names of its contributors may be used to endorse - * or promote products derived from this software without specific - * prior written permission. - * - * THIS SOFTWARE IS PROVIDED BY GENOME RESEARCH LTD AND CONTRIBUTORS "AS - * IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED - * TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A - * PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL GENOME RESEARCH - * LTD OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, - * SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT - * LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, - * DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY - * THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT - * (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE - * OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. - */ - - -#ifndef RANS_STATIC_H -#define RANS_STATIC_H - -#ifdef __cplusplus -extern "C" { -#endif - -unsigned char *rans_compress(unsigned char *in, unsigned int in_size, - unsigned int *out_size, int order); -unsigned char *rans_uncompress(unsigned char *in, unsigned int in_size, - unsigned int *out_size); - -#ifdef __cplusplus -} -#endif - -#endif /* RANS_STATIC_H */