99db113e49bd1dd42a3040eaed1e61188a117ecf max Wed May 13 05:44:18 2026 -0700 mucins: new locus-specific mucin VNTR/non-VNTR exon track on hs1 (alpha) Adds a new 'Locus-specific' container in the genes group with two bigGenePred subtracks (mucinsVntr, mucinsNonVntr) derived from Plender et al. 2024 supplementary table 2. The .ra and HTML files live under trackDb/human/ so future locus-specific tracks can share them; hs1 picks them up via include ../mucins.ra alpha. refs #37540 diff --git src/hg/makeDb/trackDb/human/mucins.ra src/hg/makeDb/trackDb/human/mucins.ra new file mode 100644 index 00000000000..1cc748bd2ad --- /dev/null +++ src/hg/makeDb/trackDb/human/mucins.ra @@ -0,0 +1,34 @@ +track locusSpec +superTrack on +shortLabel Locus-specific +longLabel Locus-specific annotations +group genes +visibility hide + + track mucinsNonVntr + parent locusSpec + shortLabel Mucin non-VNTR exons + longLabel Mucin gene non-VNTR exons (Plender et al. 2024 supplementary data) + type bigGenePred + bigDataUrl /gbdb/$D/locusSpec/mucins/mucinsNonVntr.bb + itemRgb on + visibility pack + searchIndex name,name2,geneName + labelFields name,name2,geneName,geneName2 + defaultLabelFields name + mouseOver <b>$name2 $name</b><br>transcript: $geneName<br>type: $type<br>length: ${chromEnd}-${chromStart} + priority 2 + + track mucinsVntr + parent locusSpec + shortLabel Mucin VNTR exons + longLabel Mucin gene VNTR exons (Plender et al. 2024 supplementary data) + type bigGenePred + bigDataUrl /gbdb/$D/locusSpec/mucins/mucinsVntr.bb + itemRgb on + visibility pack + searchIndex name,name2,geneName + labelFields name,name2,geneName,geneName2 + defaultLabelFields name + mouseOver <b>$name2 $name</b><br>transcript: $geneName<br>type: $type<br>length: ${chromEnd}-${chromStart} + priority 1