c75167799dc7d5939b879e49861653c823a81307
max
  Tue May 12 14:16:46 2026 -0700
fixing browserSetup.sh issue, reported by andy smith, no redmine

diff --git src/product/installer/browserSetup.sh src/product/installer/browserSetup.sh
index 0d9d167fc54..8952c05a8f4 100755
--- src/product/installer/browserSetup.sh
+++ src/product/installer/browserSetup.sh
@@ -1936,32 +1936,32 @@
             systemctl start mariadb
     elif which brew > /dev/null ; then
             echo2 Starting Mariadb using brew
             brew services start mariadb
     elif [ -f /usr/lib/systemd/system/mysql.service ]; then
             # at least seen in Fedora 17
             systemctl start mysql
     else
         echo2 Could not find mysql nor mysqld file in /etc/init.d nor a systemd command. Please email genome-mirror@soe.ucsc.edu.
     fi
 }
 
 function mysqlCheck
 # check all mysql tables. Rarely, some of them are in an unclosed state on the download server, this command will close them
 {
-    echo2 Checking all mysql tables after the download to make sure that they are closed
-    mysqlcheck --all-databases --auto-repair --quick --fast --silent
+    echo2 Checking all mariadb tables after the download to make sure that they are closed
+    mariadb-check --all-databases --auto-repair --quick --fast --silent
 }
 
 function hideSomeTracks
 # hide the big tracks and the ones that we are not allowed to distribute
 {
     # these tables are not used for searches by default. Searches are very slow. We focus on genes.
     notSearchTables='wgEncodeGencodeBasicV19 wgEncodeGencodeCompV17 wgEncodeGencodeBasicV14 wgEncodeGencodeBasicV17 wgEncodeGencodeCompV14 mgcFullMrna wgEncodeGencodeBasicV7 orfeomeMrna wgEncodeGencodePseudoGeneV14 wgEncodeGencodePseudoGeneV17 wgEncodeGencodePseudoGeneV19 wgEncodeGencodeCompV7 knownGeneOld6 geneReviews transMapAlnSplicedEst gbCdnaInfo oreganno vegaPseudoGene transMapAlnMRna ucscGenePfam qPcrPrimers transMapAlnUcscGenes transMapAlnRefSeq genscan bacEndPairs fosEndPairs'
 
     # these tracks are hidden by default
     hideTracks='intronEst cons100way cons46way ucscRetroAli5 mrna omimGene2 omimAvSnp'
 
     echo2 Hiding some tracks by default and removing some tracks from searches
     for db in $DBS; do
        echo $db
        if [ "$db" == "go" -o "$db" == "uniProt" -o "$db" == "visiGene" -o "$db" == "hgFixed" -o "$db" == "proteome" ] ; then