4eb8ce4c1204debcf7cf81f1de5af5a3dd9343d3 gperez2 Fri May 22 17:27:25 2026 -0700 The author requested updating the per-tissue colors to gradients. Updated the mouseDevTimecourse legend HTML to match the new colors and documented the data file update in the mm10 and mm39 makedocs. refs #37001 diff --git src/hg/makeDb/trackDb/mouseDevTimecourseDisplay.shared.html src/hg/makeDb/trackDb/mouseDevTimecourseDisplay.shared.html index 36160d9f45c..d92a55d3067 100644 --- src/hg/makeDb/trackDb/mouseDevTimecourseDisplay.shared.html +++ src/hg/makeDb/trackDb/mouseDevTimecourseDisplay.shared.html @@ -1,32 +1,29 @@

Display Conventions and Configuration

Tracks are displayed as bigBarCharts. -Bars are colored by tissue type and can be faceted by tissue and -timepoint using the track configuration controls.

+Bars are colored by tissue and developmental time point, with the shade darkening +as the time point advances from e10.5 through P0. Bars can be grouped and filtered +by tissue and time point using the track configuration controls.

-

Bars are colored by tissue:

+

Bars are colored by tissue, with a gradient that darkens as the time point advances through the eight developmental time points (e10.5, e11.5, e12.5, e13.5, e14.5, e15.5, e16.5, and P0). Not all tissues are available at all time points.

- - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + +
ColorTissue
 adrenal gland
 embryonic facial prominence
 forebrain
 heart
 hindbrain
 intestine
 kidney
 limb
 liver
 lung
 midbrain
 neural tube
 skeletal muscle tissue
 spleen
 stomach
 thymus
 urinary bladder
TissueColors by time point (earliest to latest)
thymus
P0
spleen
P0
liver
e11.5
e12.5
e13.5
e14.5
e15.5
e16.5
P0
heart
e10.5
e11.5
e12.5
e13.5
e14.5
e15.5
e16.5
P0
skeletal muscle tissue
P0
urinary bladder
P0
adrenal gland
P0
kidney
e14.5
e15.5
e16.5
P0
lung
e14.5
e15.5
e16.5
P0
stomach
e14.5
e15.5
e16.5
P0
intestine
e14.5
e15.5
e16.5
P0
limb
e10.5
e11.5
e12.5
e13.5
e14.5
e15.5
embryonic facial prominence
e10.5
e11.5
e12.5
e13.5
e14.5
e15.5
forebrain
e10.5
e11.5
e12.5
e13.5
e14.5
e15.5
e16.5
P0
midbrain
e10.5
e11.5
e12.5
e13.5
e14.5
e15.5
e16.5
P0
hindbrain
e10.5
e11.5
e12.5
e13.5
e14.5
e15.5
e16.5
P0
neural tube
e11.5
e12.5
e13.5
e14.5
e15.5
P0
- -

Within each tissue, bars are grouped by developmental time point: -e10.5, e11.5, e12.5, e13.5, e14.5, e15.5, e16.5, and P0. Not all -tissues are available at all time points.