bea3a22e1454e8fee62a026ffcec8c57af4005be markd Sat Jun 6 13:46:13 2026 -0700 added -tsv option blastToPsl and blastXmlToPsl to allow parsing scores with other programs diff --git src/hg/blastToPsl/tests/expected/protMrnaTsvTest.psl src/hg/blastToPsl/tests/expected/protMrnaTsvTest.psl new file mode 100644 index 00000000000..2bb38b8c620 --- /dev/null +++ src/hg/blastToPsl/tests/expected/protMrnaTsvTest.psl @@ -0,0 +1,186 @@ +378 0 43 0 0 0 0 0 ++ Q99983 421 0 421 AB000114 2263 100 1363 1 421, 0, 100, +13 23 0 0 1 3 1 16 ++ Q99983 421 194 233 AB001106 4131 3625 3733 2 8,28, 194,205, 3625,3649, +7 16 0 0 0 0 0 0 +- Q99983 421 282 305 AB000516 3712 1827 1896 1 23, 282, 1816, +8 14 0 0 0 0 0 0 ++ Q99983 421 333 355 AB000449 1662 882 948 1 22, 333, 882, +8 9 0 0 0 0 0 0 +- Q99983 421 2 19 AB000220 5177 1279 1330 1 17, 2, 3847, +8 10 0 0 0 0 0 0 +- Q99983 421 157 175 AB001466 3114 551 605 1 18, 157, 2509, +413 0 0 0 0 0 0 0 ++ Q99984 413 0 413 AB000115 2058 241 1480 1 413, 0, 241, +10 7 0 0 0 0 0 0 ++ Q99984 413 211 228 AB000449 1662 435 486 1 17, 211, 435, +751 0 0 0 0 0 0 0 ++ Q99985 751 0 751 AB000220 5177 562 2815 1 751, 0, 562, +8 10 0 0 0 0 0 0 ++ Q99985 751 340 358 AB000516 3712 1935 1989 1 18, 340, 1935, +10 16 0 0 1 1 1 14 +- Q99985 751 350 377 AB000516 3712 3280 3358 2 7,19, 350,358, 354,375, +7 13 0 0 0 0 0 0 +- Q99985 751 661 681 AB000468 2903 542 602 1 20, 661, 2301, +7 9 0 0 0 0 0 0 ++ Q99985 751 589 605 AB001466 3114 1048 1096 1 16, 589, 1048, +11 29 0 0 0 0 0 0 +- Q99985 751 130 170 AB000462 7300 1762 1882 1 40, 130, 5418, +883 0 94 0 0 0 0 0 ++ O14490 977 0 977 AB000277 3347 67 2998 1 977, 0, 67, +19 32 0 0 2 8 2 72 +- O14490 977 165 224 AB000277 3347 1355 1508 3 13,23,15, 165,181,209, 1839,1878,1947, +8 2 0 0 0 0 0 0 +- O14490 977 856 866 AB000462 7300 5565 5595 1 10, 856, 1705, +13 17 0 0 0 0 1 45 ++ O14490 977 360 390 AB000516 3712 2857 2950 2 21,9, 360,381, 2857,2923, +378 0 18 0 0 0 0 0 ++ Q99986 396 0 396 AB000449 1662 75 1263 1 396, 0, 75, +10 7 0 0 0 0 0 0 ++ Q99986 396 120 137 AB000115 2058 874 925 1 17, 120, 874, +8 16 0 0 0 0 0 0 +- Q99986 396 98 122 AB001106 4131 3552 3624 1 24, 98, 507, +8 14 0 0 0 0 0 0 ++ Q99986 396 269 291 AB000114 2263 1099 1165 1 22, 269, 1099, +985 0 239 0 0 0 0 0 ++ P78311 1224 0 1224 AB000459 4710 351 4023 1 1224, 0, 351, +985 0 239 0 0 0 1 2455 ++ P78311 1224 0 1224 AB000460 4833 351 4146 2 1166,58, 0,1166, 351,3972, +665 3 121 0 0 0 0 0 ++ P78311 1224 0 789 AB000461 4663 351 2718 1 789, 0, 351, +305 0 118 0 0 0 0 0 ++ P78311 1224 801 1224 AB000461 4663 2707 3976 1 423, 801, 2707, +541 0 121 0 0 0 0 0 ++ P78311 1224 146 808 AB001563 2696 708 2694 1 662, 146, 708, +17 18 0 0 1 3 2 70 ++ P78311 1224 699 737 AB000277 3347 263 374 3 19,13,3, 699,718,734, 263,326,365, +25 69 0 0 3 6 3 120 ++ P78311 1224 381 481 AB000277 3347 3007 3289 4 42,11,7,34, 381,425,438,447, 3007,3133,3166,3187, +11 10 0 0 0 0 0 0 +- P78311 1224 719 740 AB000516 3712 820 883 1 21, 719, 2829, +11 22 0 0 1 1 1 40 ++ P78311 1224 708 742 AB002110 2225 2065 2164 2 20,13, 708,729, 2065,2125, +17 26 0 0 1 7 2 71 +- P78311 1224 449 499 AB002110 2225 430 568 3 21,10,12, 449,477,487, 1657,1720,1759, +16 48 0 0 0 0 0 0 +- P78311 1224 369 433 AB000220 5177 30 222 1 64, 369, 4955, +11 26 0 0 0 0 0 0 +- P78311 1224 1061 1098 AB000462 7300 402 513 1 37, 1061, 6787, +7 8 0 0 0 0 0 0 ++ P78311 1224 1126 1141 AB000462 7300 5723 5768 1 15, 1126, 5723, +9 28 0 0 0 0 0 0 ++ P78311 1224 1047 1084 AB000462 7300 511 622 1 37, 1047, 511, +10 12 0 0 0 0 0 0 ++ P78311 1224 471 493 AB000468 2903 1716 1782 1 22, 471, 1716, +12 22 0 0 1 9 1 18 ++ P78311 1224 368 411 AB001466 3114 170 272 2 9,25, 368,386, 170,197, +14 41 0 0 0 0 0 0 ++ P78311 1224 392 447 AB001466 3114 120 285 1 55, 392, 120, +8 7 0 0 0 0 0 0 ++ P78311 1224 1117 1132 AB001466 3114 1835 1880 1 15, 1117, 1835, +1026 0 239 0 0 0 0 0 ++ P78312 1265 0 1265 AB000460 4833 351 4146 1 1265, 0, 351, +985 0 239 0 1 41 1 2332 ++ P78312 1265 0 1265 AB000459 4710 351 4023 2 1166,58, 0,1207, 351,3849, +665 3 121 0 0 0 0 0 ++ P78312 1265 0 789 AB000461 4663 351 2718 1 789, 0, 351, +305 0 118 0 1 41 1 730 ++ P78312 1265 801 1265 AB000461 4663 2707 3976 2 365,58, 801,1207, 2707,3802, +541 0 121 0 0 0 0 0 ++ P78312 1265 146 808 AB001563 2696 708 2694 1 662, 146, 708, +23 13 0 0 0 0 0 0 ++ P78312 1265 1171 1207 AB000509 3993 2792 2900 1 36, 1171, 2792, +12 13 0 0 0 0 0 0 ++ P78312 1265 1182 1207 AB000509 3993 2960 3035 1 25, 1182, 2960, +21 14 0 0 0 0 0 0 ++ P78312 1265 1171 1206 AB000462 7300 3770 3875 1 35, 1171, 3770, +11 26 0 0 0 0 0 0 +- P78312 1265 1061 1098 AB000462 7300 402 513 1 37, 1061, 6787, +7 8 0 0 0 0 0 0 ++ P78312 1265 1126 1141 AB000462 7300 5723 5768 1 15, 1126, 5723, +9 28 0 0 0 0 0 0 ++ P78312 1265 1047 1084 AB000462 7300 511 622 1 37, 1047, 511, +17 18 0 0 1 3 2 70 ++ P78312 1265 699 737 AB000277 3347 263 374 3 19,13,3, 699,718,734, 263,326,365, +25 69 0 0 3 6 3 120 ++ P78312 1265 381 481 AB000277 3347 3007 3289 4 42,11,7,34, 381,425,438,447, 3007,3133,3166,3187, +11 10 0 0 0 0 0 0 +- P78312 1265 719 740 AB000516 3712 820 883 1 21, 719, 2829, +11 22 0 0 1 1 1 40 ++ P78312 1265 708 742 AB002110 2225 2065 2164 2 20,13, 708,729, 2065,2125, +17 26 0 0 1 7 2 71 +- P78312 1265 449 499 AB002110 2225 430 568 3 21,10,12, 449,477,487, 1657,1720,1759, +16 48 0 0 0 0 0 0 +- P78312 1265 369 433 AB000220 5177 30 222 1 64, 369, 4955, +10 12 0 0 0 0 0 0 ++ P78312 1265 471 493 AB000468 2903 1716 1782 1 22, 471, 1716, +12 22 0 0 1 9 1 18 ++ P78312 1265 368 411 AB001466 3114 170 272 2 9,25, 368,386, 170,197, +14 41 0 0 0 0 0 0 ++ P78312 1265 392 447 AB001466 3114 120 285 1 55, 392, 120, +8 7 0 0 0 0 0 0 ++ P78312 1265 1117 1132 AB001466 3114 1835 1880 1 15, 1117, 1835, +671 0 121 0 0 0 0 0 ++ P78313 792 0 792 AB000461 4663 351 2727 1 792, 0, 351, +665 3 121 0 0 0 0 0 ++ P78313 792 0 789 AB000460 4833 351 2718 1 789, 0, 351, +665 3 121 0 0 0 0 0 ++ P78313 792 0 789 AB000459 4710 351 2718 1 789, 0, 351, +519 3 121 0 0 0 0 0 ++ P78313 792 146 789 AB001563 2696 708 2637 1 643, 146, 708, +17 18 0 0 1 3 2 70 ++ P78313 792 699 737 AB000277 3347 263 374 3 19,13,3, 699,718,734, 263,326,365, +25 69 0 0 3 6 3 120 ++ P78313 792 381 481 AB000277 3347 3007 3289 4 42,11,7,34, 381,425,438,447, 3007,3133,3166,3187, +10 22 0 0 0 0 0 0 ++ P78313 792 721 753 AB000277 3347 3037 3133 1 32, 721, 3037, +11 10 0 0 0 0 0 0 +- P78313 792 719 740 AB000516 3712 820 883 1 21, 719, 2829, +11 22 0 0 1 1 1 40 ++ P78313 792 708 742 AB002110 2225 2065 2164 2 20,13, 708,729, 2065,2125, +17 26 0 0 1 7 2 71 +- P78313 792 449 499 AB002110 2225 430 568 3 21,10,12, 449,477,487, 1657,1720,1759, +10 12 0 0 1 2 1 14 +- P78313 792 444 468 AB002110 2225 507 573 2 7,15, 444,453, 1652,1673, +16 48 0 0 0 0 0 0 +- P78313 792 369 433 AB000220 5177 30 222 1 64, 369, 4955, +10 12 0 0 0 0 0 0 ++ P78313 792 471 493 AB000468 2903 1716 1782 1 22, 471, 1716, +9 6 0 0 0 0 0 0 +- P78313 792 564 579 AB000468 2903 1772 1817 1 15, 564, 1086, +12 22 0 0 1 9 1 18 ++ P78313 792 368 411 AB001466 3114 170 272 2 9,25, 368,386, 170,197, +14 41 0 0 0 0 0 0 ++ P78313 792 392 447 AB001466 3114 120 285 1 55, 392, 120, +8 4 0 0 0 0 0 0 ++ P78313 792 723 735 AB000462 7300 195 231 1 12, 723, 195, +479 1 81 0 0 0 0 0 ++ P78314 561 0 561 AB000462 7300 261 1944 1 561, 0, 261, +16 29 0 0 0 0 1 85 +- P78314 561 249 294 AB000462 7300 592 736 2 38,7, 249,287, 6564,6687, +7 14 0 0 0 0 0 0 +- P78314 561 292 313 AB000462 7300 310 373 1 21, 292, 6927, +13 28 0 0 0 0 0 0 +- P78314 561 257 298 AB000462 7300 5514 5637 1 41, 257, 1663, +20 36 0 0 1 4 1 56 +- P78314 561 358 418 AB000459 4710 2986 3154 2 28,28, 358,390, 1556,1640, +20 36 0 0 1 4 1 56 +- P78314 561 358 418 AB000460 4833 2986 3154 2 28,28, 358,390, 1679,1763, +20 36 0 0 1 4 1 56 +- P78314 561 358 418 AB000461 4663 2939 3107 2 28,28, 358,390, 1556,1640, +16 26 0 0 1 3 1 56 +- P78314 561 268 313 AB002283 607 415 541 2 28,14, 268,299, 66,150, +11 9 0 0 0 0 1 17 +- P78314 561 294 314 AB002283 607 239 302 2 7,13, 294,301, 305,329, +19 26 0 0 2 4 3 85 ++ P78314 561 265 314 AB001466 3114 612 756 4 18,13,7,7, 265,283,297,307, 612,675,714,735, +8 25 0 0 0 0 0 0 ++ P78314 561 262 295 AB001466 3114 2244 2343 1 33, 262, 2244, +15 22 0 0 1 1 1 18 ++ P78314 561 367 405 AB001466 3114 290 401 2 9,28, 367,377, 290,317, +19 46 0 0 0 0 2 114 ++ P78314 561 248 313 AB001466 3114 1421 1652 3 26,13,26, 248,274,287, 1421,1505,1574, +14 26 0 0 0 0 0 0 ++ P78314 561 378 418 AB000277 3347 2906 3026 1 40, 378, 2906, +17 41 0 0 0 0 1 49 ++ P78314 561 370 428 AB000277 3347 3011 3188 2 23,35, 370,393, 3011,3083, +7 5 0 0 0 0 0 0 +- P78314 561 257 269 AB000277 3347 557 593 1 12, 257, 2754, +9 13 0 0 0 0 0 0 ++ P78314 561 494 516 AB000220 5177 3899 3965 1 22, 494, 3899, +12 24 0 0 0 0 0 0 ++ P78314 561 376 412 AB000516 3712 2820 2928 1 36, 376, 2820, +7 4 0 0 0 0 0 0 ++ P78314 561 474 485 AB000509 3993 32 65 1 11, 474, 32, +11 20 0 0 0 0 0 0 ++ P78314 561 387 418 AB000468 2903 1559 1652 1 31, 387, 1559, +165 0 25 0 0 0 0 0 ++ P78317 190 0 190 AB000468 2903 297 867 1 190, 0, 297, +13 11 0 0 1 1 1 26 ++ P78317 190 151 176 AB000509 3993 225 297 2 13,11, 151,165, 225,264, +10 15 0 0 0 0 0 0 ++ P78317 190 109 134 AB000516 3712 2768 2843 1 25, 109, 2768, +8 11 0 0 0 0 0 0 ++ P78317 190 151 170 AB000449 1662 503 560 1 19, 151, 503, +9 7 0 0 1 1 1 12 +- P78317 190 116 133 AB000277 3347 737 785 2 6,10, 116,123, 2562,2580, +7 14 0 0 0 0 0 0 +- P78317 190 143 164 AB001466 3114 1955 2018 1 21, 143, 1096, +557 0 0 0 0 0 0 0 ++ O00463 557 0 557 AB000509 3993 54 1725 1 557, 0, 54, +13 11 0 0 0 0 1 29 ++ O00463 557 57 81 AB000468 2903 750 825 2 13,11, 57,70, 750,792, +10 18 0 0 0 0 0 0 +- O00463 557 279 307 AB000468 2903 2318 2402 1 28, 279, 501, +6 7 0 0 0 0 0 0 +- O00463 557 60 73 AB000468 2903 1777 1816 1 13, 60, 1087, +10 22 0 0 0 0 0 0 +- O00463 557 306 338 AB000115 2058 1415 1511 1 32, 306, 547, +8 11 0 0 0 0 0 0 +- O00463 557 210 229 AB001106 4131 206 263 1 19, 210, 3868, +965 0 97 0 0 0 0 0 ++ O43279 1087 25 1087 AB000516 3712 228 3414 1 1062, 25, 228, +12 13 0 0 1 2 1 14 +- O43279 1087 757 784 AB000516 3712 2461 2536 2 7,18, 757,766, 1176,1197, +27 46 16 0 4 15 4 164 ++ O43279 1087 867 971 AB001466 3114 1385 1652 5 5,45,12,20,7, 867,874,925,940,964, 1385,1400,1535,1571,1631, +9 10 0 0 0 0 0 0 ++ O43279 1087 941 960 AB001466 3114 818 875 1 19, 941, 818, +13 25 0 0 0 0 1 67 ++ O43279 1087 933 971 AB000462 7300 3070 3187 2 32,6, 933,965, 3070,3169, +7 9 0 0 0 0 0 0 +- O43279 1087 950 966 AB000462 7300 4076 4124 1 16, 950, 3176, +9 20 0 0 0 0 0 0 +- O43279 1087 800 829 AB000462 7300 1941 2028 1 29, 800, 5272, +11 16 0 0 0 0 1 20 ++ O43279 1087 917 944 AB002283 607 390 477 2 7,20, 917,924, 390,417, +8 10 0 0 0 0 0 0 ++ O43279 1087 594 612 AB000220 5177 1582 1636 1 18, 594, 1582, +12 28 0 0 0 0 0 0 +- O43279 1087 914 954 AB000277 3347 2744 2864 1 40, 914, 483, +134 0 0 0 0 0 0 0 ++ O15100 134 0 134 AB000897 402 0 402 1 134, 0, 0, +12 27 0 0 0 0 0 0 ++ O15100 134 76 115 AB000468 2903 2567 2684 1 39, 76, 2567, +7 9 0 0 0 0 0 0 +- O15100 134 57 73 AB000449 1662 1330 1378 1 16, 57, 284, +9 19 0 0 0 0 0 0 ++ O15100 134 96 124 AB000462 7300 1029 1113 1 28, 96, 1029, +5 2 0 0 0 0 0 0 +- O15100 134 46 53 AB000462 7300 3343 3364 1 7, 46, 3936, +141 0 0 0 0 0 0 0 ++ P17774 141 0 141 AB001106 4131 100 523 1 141, 0, 100, +12 18 0 0 1 3 1 12 ++ P17774 141 78 111 AB000277 3347 2063 2153 2 6,24, 78,87, 2063,2081, +11 31 0 0 0 0 0 0 ++ P17774 141 22 64 AB000114 2263 1192 1318 1 42, 22, 1192, +8 16 0 0 1 1 1 22 ++ P17774 141 71 96 AB000462 7300 4004 4076 2 11,13, 71,83, 4004,4037, +6 5 0 0 0 0 0 0 ++ P17774 141 92 103 AB002283 607 165 198 1 11, 92, 165, +447 0 114 0 0 0 0 0 ++ O43281 561 0 561 AB001466 3114 608 2291 1 561, 0, 608, +9 10 0 0 0 0 0 0 ++ O43281 561 161 180 AB001466 3114 2402 2459 1 19, 161, 2402, +22 56 0 0 1 4 2 68 +- O43281 561 393 475 AB000462 7300 1752 1998 3 14,14,50, 393,411,425, 5302,5344,5398, +15 10 0 0 0 0 1 68 +- O43281 561 157 182 AB000462 7300 4088 4211 2 10,15, 157,167, 3089,3167, +8 7 0 0 0 0 0 0 ++ O43281 561 409 424 AB000459 4710 3702 3747 1 15, 409, 3702, +17 40 0 0 0 0 1 66 +- O43281 561 157 214 AB000459 4710 3019 3196 2 30,27, 157,187, 1514,1610, +8 8 0 0 0 0 0 0 ++ O43281 561 405 421 AB000459 4710 3547 3595 1 16, 405, 3547, +8 7 0 0 0 0 0 0 ++ O43281 561 409 424 AB000461 4663 3655 3700 1 15, 409, 3655, +17 40 0 0 0 0 1 66 +- O43281 561 157 214 AB000461 4663 2972 3149 2 30,27, 157,187, 1514,1610, +8 8 0 0 0 0 0 0 ++ O43281 561 405 421 AB000461 4663 3500 3548 1 16, 405, 3500, +8 7 0 0 0 0 0 0 ++ O43281 561 409 424 AB000460 4833 3702 3747 1 15, 409, 3702, +17 40 0 0 0 0 1 66 +- O43281 561 157 214 AB000460 4833 3019 3196 2 30,27, 157,187, 1637,1733, +8 8 0 0 0 0 0 0 ++ O43281 561 405 421 AB000460 4833 3547 3595 1 16, 405, 3547, +10 15 0 0 0 0 0 0 ++ O43281 561 393 418 AB000516 3712 2583 2658 1 25, 393, 2583, +541 0 121 0 0 0 0 0 ++ Q9UEG8 662 0 662 AB001563 2696 708 2694 1 662, 0, 708, +541 0 121 0 0 0 0 0 ++ Q9UEG8 662 0 662 AB000460 4833 789 2775 1 662, 0, 789, +541 0 121 0 0 0 0 0 ++ Q9UEG8 662 0 662 AB000459 4710 789 2775 1 662, 0, 789, +519 3 121 0 0 0 0 0 ++ Q9UEG8 662 0 643 AB000461 4663 789 2718 1 643, 0, 789, +17 18 0 0 1 3 2 70 ++ Q9UEG8 662 553 591 AB000277 3347 263 374 3 19,13,3, 553,572,588, 263,326,365, +25 69 0 0 3 6 3 120 ++ Q9UEG8 662 235 335 AB000277 3347 3007 3289 4 42,11,7,34, 235,279,292,301, 3007,3133,3166,3187, +38 94 0 0 5 25 6 207 ++ Q9UEG8 662 222 379 AB000277 3347 2942 3341 7 27,35,13,15,4,8,30, 222,252,289,316,331,340,349, 2942,3023,3128,3167,3215,3227,3251, +10 22 0 0 0 0 0 0 ++ Q9UEG8 662 575 607 AB000277 3347 3037 3133 1 32, 575, 3037, +11 10 0 0 0 0 0 0 +- Q9UEG8 662 573 594 AB000516 3712 820 883 1 21, 573, 2829, +11 22 0 0 1 1 1 40 ++ Q9UEG8 662 562 596 AB002110 2225 2065 2164 2 20,13, 562,583, 2065,2125, +17 26 0 0 1 7 2 71 +- Q9UEG8 662 303 353 AB002110 2225 430 568 3 21,10,12, 303,331,341, 1657,1720,1759, +10 12 0 0 1 2 1 14 +- Q9UEG8 662 298 322 AB002110 2225 507 573 2 7,15, 298,307, 1652,1673, +16 48 0 0 0 0 0 0 +- Q9UEG8 662 223 287 AB000220 5177 30 222 1 64, 223, 4955, +10 12 0 0 0 0 0 0 ++ Q9UEG8 662 325 347 AB000468 2903 1716 1782 1 22, 325, 1716, +9 6 0 0 0 0 0 0 +- Q9UEG8 662 418 433 AB000468 2903 1772 1817 1 15, 418, 1086, +12 22 0 0 1 9 1 18 ++ Q9UEG8 662 222 265 AB001466 3114 170 272 2 9,25, 222,240, 170,197, +14 41 0 0 0 0 0 0 ++ Q9UEG8 662 246 301 AB001466 3114 120 285 1 55, 246, 120, +8 4 0 0 0 0 0 0 ++ Q9UEG8 662 577 589 AB000462 7300 195 231 1 12, 577, 195, +176 0 32 0 0 0 0 0 ++ Q96Q97 208 0 208 AB002110 2225 96 720 1 208, 0, 96, +15 21 0 0 0 0 1 33 ++ Q96Q97 208 167 203 AB000509 3993 482 593 2 15,21, 167,182, 482,530, +8 11 0 0 0 0 0 0 ++ Q96Q97 208 55 74 AB000460 4833 4386 4443 1 19, 55, 4386, +10 20 0 0 0 0 0 0 +- Q96Q97 208 44 74 AB000460 4833 4398 4488 1 30, 44, 345, +6 6 0 0 0 0 0 0 ++ Q96Q97 208 189 201 AB000460 4833 4419 4455 1 12, 189, 4419, +8 11 0 0 0 0 0 0 ++ Q96Q97 208 55 74 AB000461 4663 4216 4273 1 19, 55, 4216, +10 20 0 0 0 0 0 0 +- Q96Q97 208 44 74 AB000461 4663 4228 4318 1 30, 44, 345, +6 6 0 0 0 0 0 0 ++ Q96Q97 208 189 201 AB000461 4663 4249 4285 1 12, 189, 4249, +8 11 0 0 0 0 0 0 ++ Q96Q97 208 55 74 AB000459 4710 4263 4320 1 19, 55, 4263, +10 20 0 0 0 0 0 0 +- Q96Q97 208 44 74 AB000459 4710 4275 4365 1 30, 44, 345, +6 6 0 0 0 0 0 0 ++ Q96Q97 208 189 201 AB000459 4710 4296 4332 1 12, 189, 4296, +17 20 0 0 0 0 4 87 ++ Q96Q97 208 48 85 AB001466 3114 1425 1569 5 6,4,7,10,10, 48,54,58,65,75, 1425,1446,1461,1488,1539, +8 4 0 0 0 0 0 0 ++ Q96Q97 208 119 131 AB001466 3114 914 950 1 12, 119, 914, +6 0 0 0 0 0 0 0 +- Q96Q97 208 3 9 AB001466 3114 2202 2220 1 6, 3, 894, +11 11 0 0 1 3 1 24 ++ Q96Q97 208 48 73 AB000277 3347 3046 3112 2 12,10, 48,63, 3046,3082, +6 6 0 0 0 0 0 0 ++ Q96Q97 208 189 201 AB000277 3347 1884 1920 1 12, 189, 1884, +8 10 0 0 0 0 0 0 +- Q96Q97 208 48 66 AB000462 7300 3348 3402 1 18, 48, 3898, +397 0 21 0 0 0 0 0 ++ O60235 418 0 418 AB002134 1500 61 1315 1 418, 0, 61, +20 25 0 0 2 4 2 58 +- O60235 418 351 400 AB000462 7300 2220 2355 3 6,23,16, 351,358,384, 4945,4963,5032, +10 19 0 0 0 0 0 0 +- O60235 418 176 205 AB000462 7300 635 722 1 29, 176, 6578, +26 64 0 0 1 3 3 138 +- O60235 418 286 379 AB000277 3347 110 422 4 17,11,20,42, 286,303,317,337, 2925,2988,3021,3111, +139 0 0 0 0 0 0 0 ++ Q9UIM1 139 0 139 AB002283 607 37 454 1 139, 0, 37, +10 22 0 0 0 0 0 0 +- Q9UIM1 139 81 113 AB000277 3347 3239 3335 1 32, 81, 12, +6 4 0 0 0 0 0 0 ++ Q9UIM1 139 119 129 AB000277 3347 2545 2575 1 10, 119, 2545,