c7e0e71c357fa4630ac2ee1fb0520a32d408a1e2
lrnassar
  Sat Jun 13 09:33:29 2026 -0700
lrSv QA round 2: alpha-gate unpublished subtracks, trim labels, fill dataset blurbs. refs #36258

Add "release alpha" to hprc2JasmineSv and lrSv1kLin so the two unpublished /
do-not-release-yet subtracks stay on dev/alpha and do not graduate with the
supertrack (both are already excluded from the lrSvAll merge via databases.tsv).
Trim three longLabels to the 85-char limit: hprc2v21Sv, hprc2JasmineSv, and
lrSv1kLin.
lrSv.html: add the missing "Available Datasets" prose blurbs for Arab APR and
CPC so all 15 datasets have a paragraph (was table-row-only).

diff --git src/hg/makeDb/trackDb/human/lrSv.ra src/hg/makeDb/trackDb/human/lrSv.ra
index 6296dc37174..1a2afbf596e 100644
--- src/hg/makeDb/trackDb/human/lrSv.ra
+++ src/hg/makeDb/trackDb/human/lrSv.ra
@@ -249,61 +249,62 @@
     filter.svLen 0:861080
     filterByRange.svLen on
     filterLabel.svLen SV Length
     filter.insLen 0:22130
     filterByRange.insLen on
     filterLabel.insLen Insertion Length
     filter.AC 0:50
     filterByRange.AC on
     filterLabel.AC Allele Count (placeholder 50)
     skipEmptyFields on
 
     track hprc2v21Sv
     parent lrSv
     bigDataUrl /gbdb/$D/lrSv/hprc2v21.bb
     shortLabel HPRC v2.1 233 SVs
-    longLabel Structural Variants from the HPRC v2.1 Pangenome Graph (233 samples, minigraph-cactus, raw deconstruct)
+    longLabel Structural Variants from HPRC v2.1 Pangenome Graph (233 samples, minigraph-cactus)
     type bigBed 9 +
     itemRgb on
     visibility dense
     mouseOver <b>$name</b> ($svType) svLen=$svLen insLen=$insLen AF=$alleleFreq AC=$AC/$alleleNumber samples=$nSamples
     filterValues.svType INS,DEL
     filterType.svType multipleListOr
     filterLabel.svType SV Type
     filter.svLen 0:99835
     filterByRange.svLen on
     filterLabel.svLen SV Length
     filter.insLen 0:1064897
     filterByRange.insLen on
     filterLabel.insLen Insertion Length
     filter.AC 0:463
     filterByRange.AC on
     filterLabel.AC Allele Count
     filter.alleleFreq 0:1
     filterByRange.alleleFreq on
     filterLimits.alleleFreq 0:1
     filterLabel.alleleFreq Allele Frequency
     filter.snarlLevel 0:7
     filterByRange.snarlLevel on
     filterLabel.snarlLevel Snarl Level
     skipEmptyFields on
 
     track hprc2JasmineSv
     parent lrSv
+    release alpha
     bigDataUrl /gbdb/$D/lrSv/hprc2Jasmine.bb
     shortLabel HPRC2 Jasmine 231 SVs
-    longLabel Structural Variants from 231 HPRC v2 Assemblies (14 SV Callers, Jasmine-merged; Hall Lab / Liao)
+    longLabel Structural Variants from 231 HPRC v2 Assemblies (Jasmine merge of 14 SV callers)
     type bigBed 9 +
     itemRgb on
     visibility dense
     mouseOver <b>$name</b> ($svType) svLen=$svLen insLen=$insLen samples=$nSamples/$alleleNumber AF=$alleleFreq callers=$nCallers ($callers)
     filterValues.svType DEL,INS
     filterType.svType multipleListOr
     filterLabel.svType SV Type
     filter.svLen 0:30176500
     filterByRange.svLen on
     filterLabel.svLen SV Length
     filter.insLen 0:30176500
     filterByRange.insLen on
     filterLabel.insLen Insertion Length
     filter.AC 0:231
     filterByRange.AC on
@@ -498,33 +499,34 @@
     filter.svLen 0:1321484
     filterByRange.svLen on
     filterLabel.svLen SV Length
     filter.insLen 0:31711
     filterByRange.insLen on
     filterLabel.insLen Insertion Length
     filter.geneCount 0:200
     filterByRange.geneCount on
     filterLabel.geneCount Gene Count
     skipEmptyFields on
 
     # NOT FOR RELEASE: data received from Eichler lab via email, not yet published.
     # Do not add to lrSvAll merged track until a preprint or paper is available.
     track lrSv1kLin
     parent lrSv
+    release alpha
     bigDataUrl /gbdb/$D/lrSv/lin1218.bb
     shortLabel 1KG Linear 1218 SVs
-    longLabel Structural Variants from 1,218 Individuals (1000 Genomes, Linear Long-read Sequencing)
+    longLabel Structural Variants from 1,218 Individuals (1000 Genomes, Linear Long-read)
     type bigBed 9 +
     itemRgb on
     visibility dense
     mouseOver <b>$name</b> ($svType) svLen=$svLen insLen=$insLen AC=$AC/$AN AF=$AF AF_AFR=$afAfr AF_EUR=$afEur samples=$NS
     searchIndex name
     filterValues.svType DEL,INS
     filterType.svType multipleListOr
     filterLabel.svType SV Type
     filter.svLen 0:99565
     filterByRange.svLen on
     filterLabel.svLen SV Length (bp)
     filter.insLen 0:99968
     filterByRange.insLen on
     filterLabel.insLen Insertion Length (bp)
     filter.AC 0:2436