Commits for hiram

v501_preview2 to v501_base (2026-07-13 to 2026-07-20) v501

e987e68d1cb3af2af122c809ecf35053f6baabd1 Tue Jul 14 19:38:49 2026 -0700

• do not bother about uncommited log files in the kent source tree used to update the hubs refs #31811
  • src/hg/utils/otto/userRequests/chainNetTrackDb.pl - lines changed 1, context: html, text, full: html, text

9788869c3604b98837101f727d872cdb8f32590a Tue Jul 14 19:53:18 2026 -0700

• chainNet trackDb for susScr11 canFam6, otto liftOver
  • src/hg/makeDb/trackDb/pig/susScr11/susScr11.canFam6.chainNet.ra - lines changed 49, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/pig/susScr11/trackDb.ra - lines changed 1, context: html, text, full: html, text

1f772d81ca29eb447e034a476369b573bc3e7909 Tue Jul 14 19:53:26 2026 -0700

• chainNet trackDb for canFam6 susScr11, otto liftOver
  • src/hg/makeDb/trackDb/dog/canFam6/canFam6.susScr11.chainNet.ra - lines changed 49, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/dog/canFam6/trackDb.ra - lines changed 1, context: html, text, full: html, text

fa90223f31c18b4c8afab1b0fff499bbdb46f707 Thu Jul 16 08:06:37 2026 -0700

• creating listings of contrib files in the outside/genark/listings/ directory refs #34917
  • src/hg/utils/otto/genArk/pushRR.sh - lines changed 10, context: html, text, full: html, text

cb6c90791625bb8103f90f0b1bca76828117983d Fri Jul 17 13:51:50 2026 -0700

• adding a couple per user request refs #29545
  • src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/primatesAsmHub/primates.orderList.tsv - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/doc/vertebrateAsmHub/vertebrate.orderList.tsv - lines changed 1, context: html, text, full: html, text