9a63ecfed718d4ad0b2c5212c7ad8844c9d23531 lrnassar Mon Jun 29 14:21:07 2026 -0700 lrSv: add GitHub source links (makedoc, scripts, trackDb.ra) to all description pages. refs #36258 Per the updated qa-track standard, link the track's UCSC source artifacts on github.com/ucscGenomeBrowser/kent from every lrSv description page: - Add the missing links to the lrSv supertrack page and colorsDbSv. - Backfill the trackDb.ra link (third artifact) across the subtrack pages that already linked the makedoc + scripts dir. lrSv1kLin is left as its placeholder (staged, not released). diff --git src/hg/makeDb/trackDb/human/aprSv.html src/hg/makeDb/trackDb/human/aprSv.html index 283e82d44b8..f532ab2a818 100644 --- src/hg/makeDb/trackDb/human/aprSv.html +++ src/hg/makeDb/trackDb/human/aprSv.html @@ -70,31 +70,31 @@
The source APR VCF was downloaded from the Mohammed Bin Rashid University SharePoint page, mbru.ac.ae/the-arab-pangenome-reference; the accompanying project source code is at github.com/muddinmbru/arab_pangenome_reference.
The step-by-step build commands (download, graph-VCF conversion, liftOver, bigBed build) are recorded in the UCSC makeDoc for this track container: doc/hg38/lrSv.txt. The conversion scripts and autoSql schemas live in -makeDb/scripts/lrSv. +makeDb/scripts/lrSv, and the track configuration is in trackDb/human/lrSv.ra.
The data can be explored interactively with the Table Browser or Data Integrator, and accessed from scripts via our API (track=aprSv).
For automated download, the bigBed files are at http://hgdownload.soe.ucsc.edu/gbdb/hs1/lrSv/apr.bb (native) and http://hgdownload.soe.ucsc.edu/gbdb/hg38/lrSv/apr.bb (lifted).