9a63ecfed718d4ad0b2c5212c7ad8844c9d23531
lrnassar
  Mon Jun 29 14:21:07 2026 -0700
lrSv: add GitHub source links (makedoc, scripts, trackDb.ra) to all description pages. refs #36258

Per the updated qa-track standard, link the track's UCSC source artifacts on
github.com/ucscGenomeBrowser/kent from every lrSv description page:
- Add the missing links to the lrSv supertrack page and colorsDbSv.
- Backfill the trackDb.ra link (third artifact) across the subtrack pages that
already linked the makedoc + scripts dir.
lrSv1kLin is left as its placeholder (staged, not released).

diff --git src/hg/makeDb/trackDb/human/gustafsonSv.html src/hg/makeDb/trackDb/human/gustafsonSv.html
index c2d21fdad24..709136842dd 100644
--- src/hg/makeDb/trackDb/human/gustafsonSv.html
+++ src/hg/makeDb/trackDb/human/gustafsonSv.html
@@ -60,31 +60,31 @@
 benchmarked against the HPRC Sniffles2 truth and the GIAB HG002 Tier1
 region with Truvari v4.1.0.
 </p>
 <p>
 The source Jasmine-merged VCF was downloaded from the 1000 Genomes ONT S3
 bucket:
 <a href="https://s3.amazonaws.com/1000g-ont/Gustafson_etal_2024_preprint_SUPPLEMENTAL/20240423_jasmine_intrasample_noBND_custom_suppvec_alphanumeric_header_JASMINE.vcf.gz" target="_blank">
 <tt>20240423_jasmine_intrasample_noBND_custom_suppvec_alphanumeric_header_JASMINE.vcf.gz</tt></a>.
 </p>
 <p>
 The step-by-step build commands (download, format conversion, bigBed build)
 are recorded in the UCSC makeDoc for this track container:
 <a href="https://github.com/ucscGenomeBrowser/kent/blob/master/src/hg/makeDb/doc/hg38/lrSv.txt" target="_blank">
 doc/hg38/lrSv.txt</a>. The conversion scripts and autoSql schemas live in
 <a href="https://github.com/ucscGenomeBrowser/kent/tree/master/src/hg/makeDb/scripts/lrSv" target="_blank">
-makeDb/scripts/lrSv</a>.
+makeDb/scripts/lrSv</a>, and the track configuration is in <a href="https://github.com/ucscGenomeBrowser/kent/blob/master/src/hg/makeDb/trackDb/human/lrSv.ra" target="_blank">trackDb/human/lrSv.ra</a>.
 </p>
 
 <h2>Data Access</h2>
 <p>
 The data can be explored interactively in table format with the
 <a href="../cgi-bin/hgTables">Table Browser</a> or the
 <a href="../cgi-bin/hgIntegrator">Data Integrator</a>, and accessed
 programmatically through our <a href="https://api.genome.ucsc.edu">API</a>,
 track=<i>gustafsonSv</i>.
 </p>
 <p>
 The bigBed is available from
 <a href="http://hgdownload.soe.ucsc.edu/gbdb/hg38/lrSv/" target="_blank">our
 download server</a> as <tt>gustafson.bb</tt>. Example:
 <tt>bigBedToBed http://hgdownload.soe.ucsc.edu/gbdb/hg38/lrSv/gustafson.bb -chrom=chr21 -start=0 -end=100000000 stdout</tt>.