9a63ecfed718d4ad0b2c5212c7ad8844c9d23531
lrnassar
  Mon Jun 29 14:21:07 2026 -0700
lrSv: add GitHub source links (makedoc, scripts, trackDb.ra) to all description pages. refs #36258

Per the updated qa-track standard, link the track's UCSC source artifacts on
github.com/ucscGenomeBrowser/kent from every lrSv description page:
- Add the missing links to the lrSv supertrack page and colorsDbSv.
- Backfill the trackDb.ra link (third artifact) across the subtrack pages that
already linked the makedoc + scripts dir.
lrSv1kLin is left as its placeholder (staged, not released).

diff --git src/hg/makeDb/trackDb/human/lrSvAll.html src/hg/makeDb/trackDb/human/lrSvAll.html
index 29ef4d56918..1b97f6518c6 100644
--- src/hg/makeDb/trackDb/human/lrSvAll.html
+++ src/hg/makeDb/trackDb/human/lrSvAll.html
@@ -43,31 +43,31 @@
 the bigBed of each contributing subtrack (configured in
 <tt>databases.tsv</tt>) and groups records that share an identical
 <tt>(chromosome, start, end)</tt> position and SV type. For each merged locus
 the script records the set of contributing databases (<tt>sources</tt>), the
 number of those databases (<tt>sourceCount</tt>), the sum of their allele counts
 (<tt>AC</tt>), and the minimum and maximum allele frequency across databases
 that report one (<tt>minAF</tt>, <tt>maxAF</tt>). The per-database allele counts
 are carried as additional columns.
 </p>
 <p>
 The step-by-step build commands are recorded in the UCSC makeDoc for this track
 collection:
 <a href="https://github.com/ucscGenomeBrowser/kent/blob/master/src/hg/makeDb/doc/hg38/lrSv.txt" target="_blank">
 doc/hg38/lrSv.txt</a>. The merge script and autoSql schema live in
 <a href="https://github.com/ucscGenomeBrowser/kent/tree/master/src/hg/makeDb/scripts/lrSv" target="_blank">
-makeDb/scripts/lrSv</a>.
+makeDb/scripts/lrSv</a>, and the track configuration is in <a href="https://github.com/ucscGenomeBrowser/kent/blob/master/src/hg/makeDb/trackDb/human/lrSvAll.ra" target="_blank">trackDb/human/lrSvAll.ra</a>.
 </p>
 
 <h2>Data Access</h2>
 <p>
 The data can be explored interactively with the
 <a href="../cgi-bin/hgTables">Table Browser</a> or the
 <a href="../cgi-bin/hgIntegrator">Data Integrator</a>, and accessed
 programmatically through our <a href="https://api.genome.ucsc.edu">API</a>,
 track=<i>lrSvAll</i>.
 </p>
 <p>
 The bigBed is available from
 <a href="http://hgdownload.soe.ucsc.edu/gbdb/$db/lrSv/" target="_blank">our
 download server</a> as <tt>lrSvAll.bb</tt>. Example:
 <tt>bigBedToBed http://hgdownload.soe.ucsc.edu/gbdb/$db/lrSv/lrSvAll.bb -chrom=chr21 -start=0 -end=100000000 stdout</tt>.