9a63ecfed718d4ad0b2c5212c7ad8844c9d23531 lrnassar Mon Jun 29 14:21:07 2026 -0700 lrSv: add GitHub source links (makedoc, scripts, trackDb.ra) to all description pages. refs #36258 Per the updated qa-track standard, link the track's UCSC source artifacts on github.com/ucscGenomeBrowser/kent from every lrSv description page: - Add the missing links to the lrSv supertrack page and colorsDbSv. - Backfill the trackDb.ra link (third artifact) across the subtrack pages that already linked the makedoc + scripts dir. lrSv1kLin is left as its placeholder (staged, not released). diff --git src/hg/makeDb/trackDb/human/tommoJpSv.html src/hg/makeDb/trackDb/human/tommoJpSv.html index cd8af7be4f9..33d7078a571 100644 --- src/hg/makeDb/trackDb/human/tommoJpSv.html +++ src/hg/makeDb/trackDb/human/tommoJpSv.html @@ -58,31 +58,31 @@ trio families; allele frequencies in this track are computed from the 222 unrelated parents to avoid double-counting.
The site-only VCF tommo-JSV1-20211208-GRCh38-without-genotype-count.vcf.gz was downloaded from the jMorp JSV1 download page, tommo-jsv1-20211208-af.
The step-by-step build commands (download, format conversion, bigBed build) are recorded in the UCSC makeDoc for this track container: doc/hg38/lrSv.txt. The conversion scripts and autoSql schemas live in -makeDb/scripts/lrSv. +makeDb/scripts/lrSv, and the track configuration is in trackDb/human/lrSv.ra.
Source data is available from the tommo-jsv1-20211208-af download page on the jMorp portal (ToMMo Japanese Multi Omics Reference Panel).
The information in the ToMMo jMorp database is provided only to persons who agree to jMorp's