9a63ecfed718d4ad0b2c5212c7ad8844c9d23531 lrnassar Mon Jun 29 14:21:07 2026 -0700 lrSv: add GitHub source links (makedoc, scripts, trackDb.ra) to all description pages. refs #36258 Per the updated qa-track standard, link the track's UCSC source artifacts on github.com/ucscGenomeBrowser/kent from every lrSv description page: - Add the missing links to the lrSv supertrack page and colorsDbSv. - Backfill the trackDb.ra link (third artifact) across the subtrack pages that already linked the makedoc + scripts dir. lrSv1kLin is left as its placeholder (staged, not released). diff --git src/hg/makeDb/trackDb/human/tommoJpSv.html src/hg/makeDb/trackDb/human/tommoJpSv.html index cd8af7be4f9..33d7078a571 100644 --- src/hg/makeDb/trackDb/human/tommoJpSv.html +++ src/hg/makeDb/trackDb/human/tommoJpSv.html @@ -58,31 +58,31 @@ trio families; allele frequencies in this track are computed from the 222 unrelated parents to avoid double-counting.

The site-only VCF tommo-JSV1-20211208-GRCh38-without-genotype-count.vcf.gz was downloaded from the jMorp JSV1 download page, tommo-jsv1-20211208-af.

The step-by-step build commands (download, format conversion, bigBed build) are recorded in the UCSC makeDoc for this track container: doc/hg38/lrSv.txt. The conversion scripts and autoSql schemas live in -makeDb/scripts/lrSv. +makeDb/scripts/lrSv, and the track configuration is in trackDb/human/lrSv.ra.

Data Access

Source data is available from the tommo-jsv1-20211208-af download page on the jMorp portal (ToMMo Japanese Multi Omics Reference Panel).

Conditions of Use

The information in the ToMMo jMorp database is provided only to persons who agree to jMorp's