aaead1eeb6e454442e1a6c6dcb6a7c41cf3991d6 lrnassar Tue Jun 30 16:49:27 2026 -0700 varFreqs: July 1, 2026 release announcement, newsarch + indexNews + pennantIcon. refs #36642 Adds the New SNV Frequencies supertrack release entry to newsarch.html (anchor #070126) and indexNews.html for the upcoming July 1, 2026 release. The newsarch entry features rs4986893, the CYP2C19 East Asian founder stop-gained variant, as the screenshot example. Updates the varFreqs supertrack pennantIcon to point to the new anchor with hover text "Released Jul. 1, 2026". diff --git src/hg/makeDb/trackDb/human/varFreqs.ra src/hg/makeDb/trackDb/human/varFreqs.ra index bd38b65f641..c9d117642e9 100644 --- src/hg/makeDb/trackDb/human/varFreqs.ra +++ src/hg/makeDb/trackDb/human/varFreqs.ra @@ -1,23 +1,23 @@ track varFreqs shortLabel SNV Frequencies longLabel SNV Frequencies from various cohorts or national projects group varRep type bed 12 visibility hide superTrack on -pennantIcon New red ../goldenPath/newsarch.html#TBD "Released TBD" +pennantIcon New red ../goldenPath/newsarch.html#070126 "Released Jul. 1, 2026" track varFreqsAffected shortLabel Disease cohorts longLabel SNV Frequencies: variants in ~130,000 affected or case individuals (autism, schizophrenia, rare disease cohorts) type bigBed 9 + parent varFreqs on bigDataUrl /gbdb/$D/varFreqs/_affected/varFreqsAffected.bb tableBrowser off visibility pack itemRgb on maxWindowToDraw 5000000 priority 0.11 mouseOver <b>Var:</b> ${name}<br><b>AA change:</b> ${aaChange}<br><b>Var type:</b> ${varType}<br><b>Conseq:</b> ${consequence}<br><b>Affected AF:</b> ${affectedAF}<br><b>Affected AC/AN:</b> ${affectedAC} / ${affectedAN}<br><b>Affected cohorts:</b> ${affectedCohorts}<br><b>Top affected by AF:</b> ${topAffectedSources}<br><b>Background AF:</b> ${backgroundAF} filterValues.affectedCohorts SPARK|SFARI SPARK WES,SFARI_WGS|SFARI SPARK WGS,GREGoR|GREGoR,SCHEMA|SCHEMA,GA4K|GA4K PacBio LR filterType.affectedCohorts multipleListOr