e6bcec351aa8f5bc7218e8862e15c149aadb3479
lrnassar
  Fri Jul 10 12:18:40 2026 -0700
lrSv: complete the longReadVariants rename - reparent subtracks and update refs. refs #36258

Completes the previous rename commit (which carried only the colorsDbLegacy file
moves). Renames "track lrSv" to "track longReadVariants" in lrSv.ra (adds
"html lrSv" to keep the existing description page), reparents all subtracks plus
the merged lrSvAll and its lrSvMergeAll.py generator, and updates the hs1
override, relatedTracks.ra, and the mei/meiHgsvc3/srSv/lrSvAll cross-links.
Retitles the retired colorsDbLegacy track and reparents its subtracks. Only the
internal track name changes; subtrack names, /gbdb/$D/lrSv/ data paths, and the
lrSv.ra filename are unchanged.

diff --git src/hg/makeDb/trackDb/human/srSv.html src/hg/makeDb/trackDb/human/srSv.html
index 252ace3e465..caccfd8b171 100644
--- src/hg/makeDb/trackDb/human/srSv.html
+++ src/hg/makeDb/trackDb/human/srSv.html
@@ -1,21 +1,21 @@
 <h2>Description</h2>
 <p>
 This track collection contains structural variant (SV) and copy-number variant
 (CNV) callsets derived from Illumina <b>short-read</b> sequencing. Most SV
 tracks in the browser now come from long-read platforms (see the companion
-<a href="hgTrackUi?g=lrSv">Long-read SVs</a> supertrack); the short-read
+<a href="hgTrackUi?g=longReadVariants">Long-read SVs</a> supertrack); the short-read
 callsets here are included as comparators so users can evaluate the extra
 sensitivity of long-read calls and cross-check a variant across technologies.
 </p>
 
 <h3>Available Datasets</h3>
 <p>
 SV length statistics (min / median / max) are computed from the <tt>svLen</tt>
 field of each track, in base pairs. For the Abel CCDG callset, a large
 fraction of records are breakend (BND) translocations where <tt>svLen=-1</tt>
 is used as a sentinel, which shows up in both min and median.
 </p>
 <table class="stdTbl">
 <tr>
   <th>Dataset</th>
   <th>N samples</th>