Commits for chmalee

v502_preview2 to v502_base (2026-08-04 to 2026-08-10) v502

c3788110e8d865774fff8197cf5b47350472ba64 Tue Aug 4 11:26:55 2026 -0700

• Fix hubSpace hook error handling and nested hub path handling, refs #37964 Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
  • src/hg/hgHubConnect/hooks/hooklib.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgHubConnect/hooks/hooklib.h - lines changed 7, context: html, text, full: html, text
  • src/hg/hgHubConnect/hooks/pre-create.c - lines changed 7, context: html, text, full: html, text
  • src/hg/hgHubConnect/hooks/pre-finish.c - lines changed 41, context: html, text, full: html, text
  • src/hg/inc/userdata.h - lines changed 14, context: html, text, full: html, text
  • src/hg/js/hgMyData.js - lines changed 34, context: html, text, full: html, text
  • src/hg/lib/userdata.c - lines changed 172, context: html, text, full: html, text

373b5c4187422a9584814dcfa324028fd2e50f14 Tue Aug 4 15:00:30 2026 -0700

• Have the pre-finish hook return the rows it wrote, and fix the table display bugs that the real row data now lets us resolve, refs #37999 Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
  • src/hg/hgHubConnect/hooks/hooklib.c - lines changed 15, context: html, text, full: html, text
  • src/hg/hgHubConnect/hooks/hooklib.h - lines changed 4, context: html, text, full: html, text
  • src/hg/hgHubConnect/hooks/pre-finish.c - lines changed 24, context: html, text, full: html, text
  • src/hg/hgHubConnect/trackHubWizard.c - lines changed 18, context: html, text, full: html, text
  • src/hg/inc/userdata.h - lines changed 8, context: html, text, full: html, text
  • src/hg/js/hgMyData.js - lines changed 196, context: html, text, full: html, text
  • src/hg/lib/userdata.c - lines changed 67, context: html, text, full: html, text

25a03671f5c95936def6417c86b830e214d51d76 Wed Aug 5 11:38:27 2026 -0700

• Name the hub from the 2bit or hub.txt, and keep the batch inputs in step with the files, refs #37972 Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
  • src/hg/js/hgMyData.js - lines changed 166, context: html, text, full: html, text

616c17576bf1e99f9452a8b64fc62121b3fd19db Wed Aug 5 12:39:46 2026 -0700

• Refuse a batch that would put more than one genome in a hub we build, refs #37998 Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
  • src/hg/js/hgMyData.js - lines changed 103, context: html, text, full: html, text

c8c6f609f1998f92db7e4bbb329e252b50f8edd9 Thu Aug 6 11:42:01 2026 -0700

• hubspace: fixing bugs from nightly code review and what Gerardo noted in #37964-note 12 Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
  • src/hg/js/hgMyData.js - lines changed 89, context: html, text, full: html, text