The track contains all 107,445 SVs in the reference panel: 59,953 insertions, 38,459 deletions, 5,729 inversions, 2,696 breakends, and 608 duplications. Each variant is annotated with its overall allele frequency; allele frequencies across five superpopulations (African, Admixed American, East Asian, European, and South Asian); Hardy-Weinberg equilibrium p-values; and imputation accuracy metrics from internal leave-one-out validation and UK Biobank imputation. For SVs reaching genome-wide significance, the associated traits, p-values, and INFO scores are listed on the corresponding variant details page.
-The 888 samples in this dataset are a subset of the 1,019 samples included in -the 1KG ONT Vienna track (Schloissnig et -al. 2025), with both datasets based on the same underlying sequencing data. +This dataset is an independent reprocessing of the same Oxford Nanopore reads +used for the 1KG ONT Vienna track +(Schloissnig et al. 2025). The 888 samples in this dataset are a subset of the +1,019 samples included in that track, with both datasets based on the same +underlying sequencing data. However, the data-processing and SV-calling methods differ between the two tracks. The imputation reference panel, UK Biobank imputation results, and SV-wide association study (SV-WAS) results described here are specific to this track.
Items are colored by SV type, matching the other subtracks of the container:
| Deletion (DEL) | |
| Insertion (INS) |