d356fdc7acdc6b715b559ad6cd8a72d651c282ee angie Fri Aug 28 08:31:06 2026 -0700 Add genotype and None to colorByOptions -- they're not automatically included. diff --git src/hg/utils/otto/mtb/taxonium.annotated.config.json src/hg/utils/otto/mtb/taxonium.annotated.config.json index f1e2076841f..86e9b8a102a 100644 --- src/hg/utils/otto/mtb/taxonium.annotated.config.json +++ src/hg/utils/otto/mtb/taxonium.annotated.config.json @@ -35,31 +35,32 @@ "colorByOptions": [ "meta_continent", "meta_country", "meta_region", "meta_host_commonname", "meta_host_scienname", "meta_tbprof_sublin", "meta_tbprofiler_lineage_usher", "meta_lineage", "meta_organism", "meta_strain", "meta_tbprof_drtype", "meta_pheno_AMIKACIN", "meta_pheno_CAPREOMYCIN", "meta_pheno_CIPROFLOXACIN", "meta_pheno_CYCLOSERINE", "meta_pheno_ETHAMBUTOL", "meta_pheno_ETHIONAMIDE", "meta_pheno_ISONIAZID", "meta_pheno_KANAMYCIN", "meta_pheno_MOXIFLOXACIN", "meta_pheno_OFLOXACIN", "meta_pheno_PAS", "meta_pheno_PYRAZINAMIDE", "meta_pheno_RIFAMPICIN", "meta_pheno_STREPTOMYCIN", "meta_pheno_BEDAQUILINE", "meta_pheno_CLOFAZIMINE", "meta_pheno_DELAMANID", "meta_pheno_LEVOFLOXACIN", - "meta_pheno_LINEZOLID", "meta_pheno_RIFABUTIN" + "meta_pheno_LINEZOLID", "meta_pheno_RIFABUTIN", + "genotype", "None" ] }, "defaultColorByField": "meta_tbprof_sublin", "search_types": [ { "name": "name", "label": "Name", "type": "text_match" }, { "name": "meta_country", "label": "Country", "type": "text_match" }, { "name": "meta_region", "label": "Region", "type": "text_match" }, { "name": "meta_host_commonname", "label": "Host common name", "type": "text_match" }, { "name": "meta_host_scienname", "label": "Host scientific name", "type": "text_match" }, { "name": "meta_tbprof_sublin", "label": "Lineage from TBProfiler", "type": "text_exact" }, { "name": "meta_tbprofiler_lineage_usher", "label": "Lineage assigned by UShER", "type": "text_exact" }, { "name": "meta_lineage", "label": "Lineage from literature / BioSample", "type": "text_exact" }, { "name": "meta_organism", "label": "Scientific name inferred from submission data", "type": "text_exact" }, { "name": "meta_strain", "label": "Strain from submission or literature", "type": "text_exact" }, { "name": "meta_tbprof_drtype", "label": "TBProfiler drug resistance type", "type": "text_exact" },