d433a2f3c25a7364956f5904c9e391d93eb3a3c8 angie Wed Aug 26 17:01:55 2026 -0700 Many new lineages and a few tweaks. diff --git src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv index 349cda6e09b..6c6558ccb7f 100644 --- src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv +++ src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv @@ -1222,30 +1222,32 @@ PA.1.3 PA.1 > G28727T > C2416T > A10984G PA.1.4 PA.1 > G28727T > C22624T,G24257T,A25492G > T7153C PA.2 MC.10.1.1 > G28736T > C21727T,C25276T PA.3 MC.10.1.1 > C11003T PA.4 MC.10.1.1 > C900T PA.4.1 PA.4 > C6128T > A23534G > C10681N PA.4.2 PA.4 > G25166C MC.10.1.2 MC.10.1 > C28542T > C10252N,T1702N MC.10.1.3 MC.10.1 > C29409T MC.10.1.4 MC.10.1 > C27847T MC.10.1.5 MC.10.1 > T22981C MC.10.1.6 MC.10.1 > G22599C PH.1 MC.10.1.6 > G2144T,G12832A > G25352T MC.10.1.7 MC.10.1 > C17156T > A3948G PJ.1 MC.10.1.7 > C13694T,G22599C +PJ.2 MC.10.1.7 > C2910T,C7749T > C5184T,T14619C,C23585A > C21627A,C22879A,A22896C +PJ.2.1 PJ.2 > C6726T,G9756A,A9830G,G22599C,T22916A,G22917A,C29421T > C934T,G2267A,C2470T,C5178T,C5183T, T5184C ,T5406C,G25352T,C26985A > G22132T,G22899C,C23202A, T23423C ,G23429T,G24077A,T24079A,G24434T,A24999G,A25067T > C10416N,C14697N,C22792N,C26801N,A28715N MC.10.1.8 MC.10.1 > G18960A,T28094A MC.10.2 MC.10 > A10323G > T13804C,T21864C,C22689A,T28924C MC.10.2.1 MC.10.2 > A23598G,G27706T > C16041N,G6454N,C18029N PE.1 MC.10.2 > A23598G,G27706T > C16041T,G6454T,C18029T > G23580C PE.1.1 PE.1 > C22326T PE.1.1.1 PE.1.1 > G22319C PE.1.2 PE.1 > G25012T PE.1.3 PE.1 > G2588A,T3836G PE.1.4 PE.1 > C2902T > C15342T,C27476T > A22896C PE.1.4.1 PE.1.4 > G25088T PE.1.4.2 PE.1.4 > C8240T,G28109T PE.1.4.3 PE.1.4 > C21716A PE.1.4.4 PE.1.4 > A25589G > T28098C > C27294T > G25064A > C3817N,A7301N PE.1.5 PE.1 > C23709T PE.1.6 PE.1 > C11050T @@ -1561,30 +1563,36 @@ QR.2 LF.7.7.2 > C26022T > T18894C, C22995G > C23277T LF.7.8 LF.7 > T22993C > C7051T,A10323G > A22896C ,C23589A > T18177N LF.7.9 LF.7 > C22986T > A22896C > T22884G LF.7.9.1 LF.7.9 > G25523A > C9592T,C15660T > C4586T PY.1 LF.7.9.1 > C19029T > T27484C > A10978T PY.1.1 PY.1 > A23598G > C1722T,G8863A PY.1.1.1 PY.1.1 > G11851T > G22865T RF.1 PY.1.1.1 > C12439T RF.2 PY.1.1.1 > C14183T,C25469T RF.3 PY.1.1.1 > A6366G,T22702C > A22106G RF.4 PY.1.1.1 > C8683T RF.5 PY.1.1.1 > A22995C > G22021T RF.5.1 RF.5 > G5554T,C11967T RF.5.2 RF.5 > G16914A > G21255T > T28678C,C29358T > C5183T,C8814T RF.5.3 RF.5 > C25546T > T16908N,A25363N +RF.5.3.1 RF.5.3 > T16908C,A25363C > G25352C > C13680N +RF.5.3.2 RF.5.3 > T16908C,A25363C > C832T,G1980T,C9803T,C17304T,G20398A > C21962A +RF.5.4 RF.5 > C5178A > C15656T +RF.5.4.1 RF.5.4 > C25517T > G28884A +RF.5.4.2 RF.5.4 > C6318T,C6726T > T10744N +RF.6 PY.1.1.1 > C1997T,T23047C PY.1.2 PY.1 > C6781T,T6782C,C28045T PY.1.3 PY.1 > T24163C PY.1.4 PY.1 > G15380T > T21925N PY.1.4.1 PY.1 > G15380T > T21925C > C8140T > G22865T PY.1.5 PY.1 > C11173A PY.1.6 PY.1 > C29144T PY.1.7 PY.1 > C16338T PY.1.8 PY.1 > C1387T,G27516A PY.2 LF.7.9.1 > G942A PY.3 LF.7.9.1 > C17850T PY.4 LF.7.9.1 > G22567T > C22624N PY.4.1 PY.4 > C22624T > G1820A > A22995C > C14178N PY.5 LF.7.9.1 > C25624T PY.6 LF.7.9.1 > C25460T,G27788T PY.7 LF.7.9.1 > G25352T > G20915A,A21137G > A7291N,T24514N @@ -1888,61 +1896,68 @@ JQ.2.1.1 JQ.2.1 > T22928C > C1059N,C7639N,T25760N JQ.2.1.2 JQ.2.1 > T1270C,G15906T,A20334G > C23277T > A12064N,C17977N BA.2.86.4 BA.2.86 > T11940C,C22227T BA.2.86.5 BA.2.86 > C5575T,T6085C,A22151G,T23278C BA.2_10507_18744 BA.2 > T9866C > C2790T > C10507T > C18744T BA.2.86.6 BA.2.86 > C9226T LV.1 BA.2.86.6 > G14347A LV.2 BA.2.86.6 > G1738T,G3470A > C27059T > A708G,G2155T,G10902A,C15026T,G22599C,T22926C,T22928C > C24034N BA.2.86.7 BA.2.86 > T10819C,C28720T > T17497C MP.1 BA.2.86.7 > A23021G > C21646N,A23089N,C28115N MP.1.1 BA.2.86.7 > C21646T,A23021G,A23089G,C28115T > G22599C,G22604C BA.2.87 BA.2 > T9866C > C2790T > C18744T BA.2.87.1 BA.2.87 > G23040A , A22995C > A22206G > C541T,G542A,C2536T,C4012T,G4354T,T4379G,C5184T,C7296T,T7480C,C7764T,A10037G,C10702T,A11782G,C12008T,A12791C,C12896T,C15925T,C17644A,T19364C,C19698A,G21604A,G21786A,C21855T,T21939C,G22017T,G22132T,T22552C,A22812C,G22894T,T22896G,C22916A,T22942G,T23005G,C23423T,T23487G,A23598G,G23761A,C23934T,G23948C,A24369G,C25487A,T26311G,G26529A,C28045T,C28256T,T28474C,A28715G > C66N,A309N,G9190N,G15451N,C16575N,T23633N,C26833N BA.3 B.1.1 > C21846T > C23604A > A23063T > T22882G,C22995A,A23013C,C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,A23040G,A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C26270T,C26577G,G26709A,A28271T,C28311T > C21762T,G22898A > T670G,G4184A,C4321T,C9534T,G10447A,C12880T,C15714T,G22775A,C26060T,C26858T,A29510C > C832T,C11235T BA.3.1 BA.3 > C29311T > G3791A,C3792A,A22812C -BA.3.2 BA.3 > C11620T > C193N,C2037T,G2281T,T4579A,C5907T,G6476T,C9886T,C10747T,A12095C,T13375C,C14649T,T15047C,C21588T,G21624C,C21639T,T21864C,T22032C,T22054A,C22077T,A22122C,C22313T,A22538G,G22577T,G22604C,G22770A,A22786T,G22865T,A22881G,T22896C, A22898G ,G22899A,C22916T,T22917G,T22942G,A22996C,G23012A, C23013A, G23040A ,G23048A, C23075T ,G23149T,G23224T,G23311T,A23436G,T23485A,T23487G,G23522A,A23598G,C23625A,C23673T,A23946C,G24116A,C24117A,C24378T,C25114A,G25234A,G25699T,C25803T,A26275G,C26645T,A26771T,C27131T > G27382N,T27395N, A28996N +BA.3.2 BA.3 > C11620T > C193N,C2037T,G2281T,T4579A,C5907T,G6476T,C9886T,C10747T,A12095C,T13375C,C14649T,T15047C,C21588T,G21624C,C21639T,T21864C,T22032C,T22054A,C22077T,A22122C,C22313T,A22538G,G22577T,G22604C,G22770A,A22786T,G22865T,A22881G,T22896C, A22898G ,G22899A,C22916T,T22917G,T22942G,A22996C,G23012A, C23013A, G23040A ,G23048A, C23075T ,G23149T,G23224T,G23311T,A23436G,T23485A,T23487G,G23522A,A23598G,C23625A,C23673T,A23946C,G24116A,C24117A,C24378T,C25114A,G25234A,G25699T,C25803T,A26275G,C26645T,A26771T,C27131T > G27382N,T27395N, A22629N , A28996N BA.3.2.1 BA.3.2 > C23604G ,C25047G > A14920N,C17502N,C28849N,G29140N RD.1 BA.3.2.1 > A14920G,C17502T,C28849T,G29140A > A10978G RD.1.1 RD.1 > G22241T RD.1.1.1 RD.1.1 > C29085T > C2143N,C5100N,T12629N RD.1.2 RD.1 > C29160T > A8755N,C12073N BA.3.2.2 BA.3.2 > G27382C,T27395A, A28996N > A22629C,G23285T > G1043N,C7173N,G26718N RE.1 BA.3.2.2 > G1043A,C7173T,G26718T > G944A > C2592T,T6856C > T1195N RE.1.1 RE.1 > T1195C > G336A,A10323G,C14293T > C19707N,C21595N,T25129N,C25413N RE.1.1.1 RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C18747T > C19156T > G2494N RS.1 RE.1.1.1 > G2494A > C4012T,C14889T RS.1.1 RS.1 > C11767T > T6661A RS.1.1.1 RS.1.1 > C21930T RS.1.2 RS.1 > C11767T > C6190T,T12958C RS.1.3 RS.1 > C4891T RS.1.4 RS.1 > C10252T RS.1.5 RS.1 > C11767T > C21618T RS.2 RE.1.1.1 > G2494A > G6443A RS.3 RE.1.1.1 > G2494A > C3634T,G29449T > G24794T RS.4 RE.1.1.1 > G2494A > C28994T > T25159N RS.5 RE.1.1.1 > G2494A > C21638T,C25571G RS.6 RE.1.1.1 > G2494A > G29781T > C593T,C21614T > A9754N,C25572N RE.1.1.2 RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C18747T > G4665A,C21707T SJ.1 RE.1.1.2 > C17985T,T21252C > G662T,G25244T > C6638N,C21691N,T22333N RE.1.1.3 RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C25047T RE.1.1.4 RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > A14224G > T3766N SS.1 RE.1.1.4 > T3766C > A17929G,G22332T > C1441N,C26028N,C27143N +SS.1.1 SS.1 > C1441T,,C26028T,C27143T > G6894T > C1594N,G2731N,C11339N,C15763N SS.2 RE.1.1.4 > T3766C > T9867C,C25484T > C100N,C7765N,C22033N,C26768N RE.1.1.5 RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C9693T RE.1.1.6 RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C5835T +RE.1.1.7 RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > A8143G +RE.1.1.8 RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > A15486G +RE.1.1.9 RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C18747T > G526A,T7816C RE.1.2 RE.1 > T1195C > C203T,C5654T,C9836T,C22594T,C28987T +RE.1.2.1 RE.1.2 > C2727T,G13966A,G16843T > C24337T > C21952T +RE.1.2.2 RE.1.2 > C2727T,G13966A,G16843T > C6310T +RE.1.3 RE.1 > T1195C > C18004T,C20428T,G22346T > C829N,C4276N,G25494N,T29685N RE.2 BA.3.2.2 > G1043A,C7173T,G26718T > A3309G > C18582N,C19029N,A29221N RE.2.1 RE.2 > C18582T,C19029T,A29221G > C7000T,A16938G,C19154T,C22388T > C29160T > C1063N RE.2.1.1 RE.2.1 > C1063T > C4891T,T8803C SK.1 RE.2.1.1 > A16095G,A29086T RE.2.1.2 RE.2.1 > C1063T > C10594T > T25580C RE.2.1.3 RE.2.1 > C1063T > C10594T > C24109T > C5184T SL.1 RE.2.1.3 > C24771T RE.2.1.4 RE.2.1 > C1063T > C2023T,C23230T > C6471A > G10180N,C21658N RE.2.1.5 RE.2.1 > C1063T > C2023T,C23230T > C5144T,C16293T,C25339T RE.2.1.6 RE.2.1 > C1063T > C18431T > A5275N,C20313N RE.2.2 RE.2 > C18582T,C19029T,A29221G > C7000T,A16938G,C19154T,C22388T > C5884T,A10864G,C28791T RE.2.2.1 RE.2.2 > T1177C > G354A > C1663T SN.1 RE.2.2.1 > G7360T,C21638T RE.2.2.2 RE.2.2 > T1177C > G10997A,G11930A > C2902N,C17766N RU.1 RE.2.2.2 > C2902T,C17766T > C28928T > A3133N @@ -1950,34 +1965,37 @@ SM.1 RE.2.2.3 > G942A,G8612T,G19072A > C2773N RE.2.2.4 RE.2.2 > T1177C > C13255T,A25998G > C7764T RT.1 RE.2.2.4 > C21855T,G22081T > C1441N RT.2 RE.2.2.4 > C16948T RE.2.2.5 RE.2.2 > C4438T RE.2.2.6 RE.2.2 > G3259T RE.2.2.7 RE.2.2 > T1177C > G354A > A22461G RE.2.2.8 RE.2.2 > T1177C > C10726T > C24042T RE.2.2.9 RE.2.2 > T17007C SQ.1 RE.2.2.9 > G28423C SQ.1.1 SQ.1 > C4276T > G22894T,G22898A > T2014N SQ.2 RE.2.2.9 > C25069T SQ.3 RE.2.2.9 > G25606A RE.2.3 RE.2 > C18582T,C19029T,A29221G > C7000T,A16938G,C19154T,C22388T > A10864G > G12268A > C8208A,C12459T > C3784N,C3817N,C14029N RE.2.4 RE.2 > C18582T,C19029T,A29221G > C28651A +RE.2.4.1 RE.2.4 > T15858C,T18096C,C18864T > C4276T,C4540T,C8311T,C15240T,C23185T,C29769N RE.2.5 RE.2 > C18582T,C19029T,A29221G > C7000T,C19154T,C22388T > A16938G > A18558G,G21452A,C24370T > C8043T,C8619T,C10776T > G21898N RE.3 BA.3.2.2 > C19718T RE.3.1 RE.3 > C11651A,C18508T > T13902N,C23086N RE.4 BA.3.2.2 > G1043A,C7173T,G26718T > G24812T,C29171T > G488N,C3176N,T4888N,C5167N,A14283N,C19018N,C19572N,G20995N,C22388N,C29144N +RE.4.1 RE.4 > T4888C,A14283G,G20995T,C22388T > G488A,C3176G,C5167T,C19018T,C19572T,C29144T > C4331T,G7954A,C19386T,C21811T +RE.4.2 RE.4 > T4888C,A14283G,G20995T,C22388T > G488A,C3176G,C5167T,C19018T,C19572T,C29144T > C3096T, > C140N,A1381N,C17550N,G21641N,T23602N BA.4_dropout B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > T670G,G4184A,C4321T,C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G > A22786C > A22688G > A29510C > C10198T > C2790T > C28724N > G12160A > G27788N > T22917N > T23018G BA.4 B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > T670G,G4184A,C4321T,C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G > A22786C > A22688G > A29510C > C10198T > C2790T > C28724T > G12160A,G27788T > T22917G > T23018G BA.4.1 BA.4 > T21570G BA.4.1.1 BA.4.1 > A23570G BA.4.1.2 BA.4.1 > C14407T > C27644T,C29686N > C3176T BA.4.1.3 BA.4.1 > C28435T > C11758T > A2435G BA.4.1.4 BA.4.1 > G25266T BA.4.1.5 BA.4.1 > C20762T BA.4.1.6 BA.4.1 > C13329T BA.4.1.7 BA.4.1 > C17439T > A18941G > A6084G > A21717G > C26885T > C14407T BA.4.1.8 BA.4.1 > C28720T > C14322T,T18603C > G22599C BA.4.1.9 BA.4.1 > G22599C BA.4.1.10 BA.4.1 > G29179A > G25538T > A22622G > G22599C CS.1 BA.4.1.10 > C29784N > C6070T,G17259C > A22893G BA.4.1.11 BA.4.1 > G29179A > T22896C > C10615T,C27389T,C27476T > T15978C > G22599C > A22001G,A27946T @@ -3765,73 +3783,81 @@ PQ.2.1.4 PQ.2.1 > C2788T SY.1 PQ.2.1.4 > T25485C > G23126C > C10543N,G21255N PQ.2.1.5 PQ.2.1 > T24194C PQ.2.1.6 PQ.2.1 > C7420T PQ.2.1.7 PQ.2.1 > C20762T RZ.1 PQ.2.1.7 > A17008G > A22896C > T5179N,G10261N,C10702N,T11725N,C24082N RZ.2 PQ.2.1.7 > A22029T > C11962N,C29358N RZ.2.1 RZ.2 > C11962T,C29358T > G22599C > C5314N,A11576N,C15720N,C26885N PQ.2.1.8 PQ.2.1 > C13436T,G16741T,C20543T > T23386C PQ.2.1.9 PQ.2.1 > C10369T PQ.2.1.10 PQ.2.1 > C27149T PQ.2.1.11 PQ.2.1 > C24422T > T23600C,C24034T SZ.1 PQ.2.1.11 > A4774G,A6777T > C28657T > C11704T > A23267G > T23905N SZ.2 PQ.2.1.11 > A4774G,A6777T > C28657T > C1594T SZ.3 PQ.2.1.11 > A4774G,A6777T > A22896C > G1890N,C7083N +SZ.3.1 SZ.3 > G1890T,C7083T > C4655T,G22820A +SZ.4 PQ.2.1.11 > A4774G,A6777T > C28657T > A25165T > C5144N,A8992N,T19284N,T19896N PQ.2.1.12 PQ.2.1 > C6268T,T6376C PQ.2.1.13 PQ.2.1 > C21855T,T22016A > A6551N,T11737N,A11908N,C24370N,C25521N,C26768N,C28708N PQ.2.1.14 PQ.2.1 > T10612G PQ.2.1.15 PQ.2.1 > C16376T > A5353N PQ.2.1.16 PQ.2.1 > T20571C > T24235C,G25352T +TE.1 PQ.2.1.16 > C20544A > C13517T,G22364A > C8326N,C9661N,T17505N,C18312N PQ.2.1.17 PQ.2.1 > A5235G > C6926T > T15870C,G22132T > C829N PQ.2.2 PQ.2 > A24825G PQ.2.3 PQ.2 > T20310C > G23593C PQ.2.4 PQ.2 > T17449C > T2680C PQ.2.4.1 PQ.2.4 > G21893A > A15367G PQ.2.4.2 PQ.2.4 > T22995C PQ.2.4.3 PQ.2.4 > C9246T PQ.2.4.4 PQ.2.4 > C11514T +PQ.2.4.5 PQ.2.4 > G22599C > A22896G > C21742N,C27110N +TF.1 PQ.2.4.5 > C21742T,C27110T > G22131C > G7070N,C8407N,T8518N,A13991N,A15645N,T16077N,C18377N,C27524N PQ.2.5 PQ.2 > T25451C PQ.2.5.1 PQ.2.5 > A23157G PQ.2.5.2 PQ.2.5 > C1912T RQ.1 PQ.2.5.2 > C13019T > A22994G > G1820A,G14632A RQ.2 PQ.2.5.2 > A22896C ,C25350T > C1471N,C4331N,T19955N PQ.2.5.3 PQ.2.5 > A17993G > G29449N PQ.2.5.4 PQ.2.5 > G25455T PQ.2.5.5 PQ.2.5 > C398T,G22599C,C26607T > G6352N,C19029N PQ.2.5.6 PQ.2.5 > C16362T > C15045T > A22896C > A28065T > C28651N +TD.1 PQ.2.5.6 > C28651T > A23060G +PQ.2.5.7 PQ.2.5 > T23600C,C28677T > T14179N,C19881N,G19962N PQ.2.6 PQ.2 > T15366C > G8813A,G22899C,G29348T PQ.2.7 PQ.2 > C28603T PQ.2.7.1 PQ.2.7 > A23614G > A22004C > C4084N,T17838N PQ.2.7.2 PQ.2.7 > T22345C > C1426T > C25553T > C28677T > A22896C > C6990N,C18348N,T24799N,A25439N,G25963N,C27389N PQ.2.8 PQ.2 > C8344T PQ.2.8.1 PQ.2.8 > A22896C > G26828N RC.1 PQ.2.8.1 > G26828T > T22995C RC.2 PQ.2.8.1 > G26828T > A3138G > C28603N RC.2.1 RC.2 > C28603T > C23601A RC.3 PQ.2.8.1 > G26828T > C21952T RC.4 PQ.2.8.1 > G26828T > T3802C RC.5 PQ.2.8.1 > C2226T RC.6 PQ.2.8.1 > G26828T > C1263T > C23601A > C15026N RC.7 PQ.2.8.1 > G26828T > C5784T > T15597N RC.7.1 RC.7 > T15597C > C22329T RC.7.1.1 RC.7.1 > G23612A > T6082N,A8062N,T10123N,G13379N RC.8 PQ.2.8.1 > C3602T RC.9 PQ.2.8.1 > C26882T RC.10 PQ.2.8.1 > G26828T > A6204G,C6432T RC.11 PQ.2.8.1 > G26828T > T12985C,C20436T,G22599A RC.12 PQ.2.8.1 > G26828T > A7748G,A23592G > C6354T > A6616N,C13665N +RC.13 PQ.2.8.1 > G26828T > C2485T > G22820A,T25070C > G2281N,C4423N,C7604N,C8937N,T27597N PQ.2.8.2 PQ.2.8 > G22427A > C21191N,C27509N PQ.2.9 PQ.2 > C18814T PQ.2.10 PQ.2 > T13668C,A27894G PQ.2.10.1 PQ.2.10 > G25483A > C21008T,C25463G > A23598G > T826N,C5575N,C6317N,A18702N,C27970N PQ.2.11 PQ.2 > C5806T > T10771C > A13703G > T5179N PQ.2.11.1 PQ.2.11 > T5179A > T4640C, T22995C PQ.2.12 PQ.2 > T712A PQ.2.12.1 PQ.2.12 > G22899C > C15277N,C16596N,C17439N PQ.2.13 PQ.2 > C27513T PQ.2.13.1 PQ.2.13 > G1820A > C22224T,G22899C > A1632N PQ.2.14 PQ.2 > C16293T PQ.2.14.1 PQ.2.14 > C14583T > C18555T,A23598G > T22995C > A25718N,C25886N,C26645N,C26807N PQ.2.15 PQ.2 > C18377T > A24383T,G24815A > C10252N PQ.3 NB.1.8.1 > C29171T > G29234A PQ.4 NB.1.8.1 > C2842T @@ -3883,61 +3909,90 @@ PQ.13 NB.1.8.1 > T13764C PQ.13.1 PQ.13 > T22995C > C1213N PQ.13.2 PQ.13 > C20031T > G2035T,G3563A,G9203A,C23601T PQ.13.3 PQ.13 > C16293T,C25416T PQ.13.3.1 PQ.13.3 > C23277T > T29410N PQ.14 NB.1.8.1 > C3619T PQ.14.1 PQ.14 > A532G PQ.14.1.1 PQ.14.1 > T11371C,A16311G, T22995C > G22696N PQ.14.2 PQ.14 > C28603T > C12664T PQ.14.3 PQ.14 > C28603T > C26607T PQ.14.3.1 PQ.14.3 > A23598G RR.1 PQ.14.3.1 > A22896C ,G24047A > C1684T,T3477C,T25496N PQ.14.4 PQ.14 > C12049T PQ.15 NB.1.8.1 > C5583T > G1729N PQ.16 NB.1.8.1 > C10156T -PQ.16.1 PQ.16 > A22320G,A22812C,G22820A > T20361N,T25461N,G27916N,C28677N -PQ.16.1.1 PQ.16.1 > T20361C,T25461G,G27916A,C28677T > A19175G > T22995C +PQ.16.1 PQ.16 > T20361C,A22320G,A22812C,G22820A > T25461N,G27916N,C28677N +PQ.16.1.1 PQ.16.1 > T25461G,G27916A,C28677T > A19175G > T22995C SV.1 PQ.16.1.1 > G25459T SV.1.1 SV.1 > G23593C +SV.1.2 SV.1 > C20361T ,A23598G,G29000T > A23416N +SV.1.2.1 SV.1.2 > A23416T > T23065C > T8569C > G22599A +SV.1.3 SV.1 > C2675T > C21811T +SV.1.4 SV.1 > T15297C +SV.1.4.1 SV.1.4 > T12304C > C5365T,C12049T,A24877G,C25509T > A22896C > C4582N +SV.1.5 SV.1 > T16542C +SV.1.6 SV.1 > C2197T SV.2 PQ.16.1.1 > G2324A > G28223N SV.2.1 SV.2 > G28223A > A25208G +SV.2.2 SV.2 > G28223A > C12025T > T23485A +SV.2.3 SV.2 > G28223A > C15024T +SV.2.4 SV.2 > G28223A > T22897G +SV.2.5 SV.2 > G28223A > G25681A > C5673A,G22599C +SV.2.6 SV.2 > G28223A > C20233T > C29642T > C14937N +SV.2.6.1 SV.2.6 > C14937T > A2679G,C20823T,A25841G > G22599A +SV.2.7 SV.2 > G28223A > T6262C,C23114T,C26415T,T28094C > C23939T +SV.2.8 SV.2 > G28223A > C16057T +SV.3 PQ.16.1.1 > C18457A,G19174A,G19656T +SV.4 PQ.16.1.1 > G12079A > C3267T > A15213N,C15603N,G28202N +SV.4.1 SV.4 > A15213G,C15603T,G28202A > A17409G > C6762T,C22329T > C6031N,G14400N,G27637N,T28082N,G28396N +SV.4.2 SV.4 > A15213G,C15603T,G28202A > C23601T,C29409A > C26022N,T26905N +SV.4.3 SV.4 > A15213G,C15603T,G28202A > C21077T,A22896C > C2434N,C4084N,T6496N,C8683N,C11747N,T14448N +SV.5 PQ.16.1.1 > C2358T,A22896C > A1876N,G10642N PQ.17 NB.1.8.1 > T22995C PQ.17.1 PQ.17 > C7834T > C29708N PQ.17.2 PQ.17 > C13035T PQ.17.2.1 PQ.17.2 > C1102G > C13035N PQ.17.3 PQ.17 > C23601T PQ.17.4 PQ.17 > G23610A PQ.17.5 PQ.17 > A20658G > C29108T > C14818N PQ.17.6 PQ.17 > G25606T PQ.17.7 PQ.17 > A21343G PQ.17.7.1 PQ.17.7 > C23601T > A26046N PQ.17.7.2 PQ.17.7 > A26046G > A22896C > T6572N RK.1 PQ.17.7.2 > T6572C > G22820A RK.1.1 RK.1 > G28986T > T5293N,T14808N RK.1.2 RK.1 > A12088G > G7561A,T25345C +RK.1.2.1 RK.1.2 > T15264C > C7006T,C18804T > C11620T,G22899A +RK.1.2.2 RK.1.2 > T15264C > C7006T,C18804T > C4999T > C1909T +RK.1.2.3 RK.1.2 > T15264C > C7006T,C18804T > C5281T RK.1.3 RK.1 > A12088G > C16806T +RK.1.3.1 RK.1.3 > C25083T > T3547N,T3909N,C14571N,C15540N,A20198N +RK.1.4 RK.1 > A12088G > C1288T > G24928T > A2437C +RK.1.5 RK.1 > A12088G > G25563C > C27143N +RK.1.6 RK.1 > A12088G > G10997A,G18583A,A19153T,C28391T > C29555N PQ.17.8 PQ.17 > T12946C,C27813T,C28748T > C23664T > C23987T PQ.17.9 PQ.17 > T15009C > C26111T PQ.17.10 PQ.17 > T4441C PQ.17.10.1 PQ.17.10 > C23277T PQ.17.11 PQ.17 > C23277T PQ.17.11.1 PQ.17.11 > C28603T > G22599A,G25726A PQ.17.11.2 PQ.17.11 > C28603T > C27092A > T8176N,G11250N,T12113N,A24205N PQ.17.11.3 PQ.17.11 > A3915G,C8895T,T22118C > A14010N,C14407N,T16743N,C17745N,G26062N,C28000N PQ.17.12 PQ.17 > G22599C,C27476T > C5866N,C28651N PQ.17.12.1 PQ.17.12 > C15546T > G23522A +PQ.17.13 PQ.17 > G23342A > T23491C,A24383T > G1563N,G12038N,T13560N,G19800N,C27741N PQ.18 NB.1.8.1 > C23601T PQ.19 NB.1.8.1 > A21713G > G22599A PQ.20 NB.1.8.1 > G22104C PQ.21 NB.1.8.1 > G22289T > G9010N PQ.22 NB.1.8.1 > G23604A PQ.23 NB.1.8.1 > C23625T PQ.24 NB.1.8.1 > T22191C > A28049N PQ.25 NB.1.8.1 > T24903C > C28957N PQ.25.1 PQ.25 > T29524C PQ.25.2 PQ.25 > C28957T > C875T, T22995C > C1594N,C18175N,C28651N PQ.25.3 PQ.25 > C28957T > C22498T PQ.25.3.1 PQ.25.3 > C21846T PQ.26 NB.1.8.1 > T28340C PQ.27 NB.1.8.1 > C18555T > A22320T PQ.28 NB.1.8.1 > C21855T @@ -4219,40 +4274,44 @@ XFE KP.3.1.1 > C25006T > C28291A > C21627A,T21738C > G28884C > A2207G,C7609T,C8320T,G13025T,C18864A,C27600T XFF B.1.1 > A23063T > T22882G, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,T22896A,G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > G26660T > T22928C > A29408G > C29362T > T26171C > G25352T > C18131T,G22111T,G22599C XFF.1 XFF > G22865T > C14925N XFG B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G, T28297C > C8818T,C22792T,A22893G > C21627A > C29409T > T4214C,T8350C, T22896G ,A23021G,C23039G,C23277T XFG.1 XFG > G22896C > T16224N,T25479N,C27416N XFG.1.1 XFG.1 > T16224C,T25479C > G21850T > C6696T > N27416C > G26832T > A19326N,C29215N XFG.1.1.1 XFG.1.1 > A19326G,C29215T > G25855T > G27430T RP.1 XFG.1.1.1 > C2065T > A16890G > A24999G RP.2 XFG.1.1.1 > C22482T XFG.1.1.2 XFG.1.1 > A19326G,C29215T > G25855T > C23625T > G18105N XFG.1.1.3 XFG.1.1 > A19326G,C29215T > G25855T > G22030C > C8713N,C15026N,T25514N,G27798N XFG.1.1.4 XFG.1.1 > A19326G,C29215T > G25855T > G18394A XFG.1.1.5 XFG.1.1 > A19326G,C29215T > G25855T > C1889T XFG.1.1.6 XFG.1.1 > A19326G,C29215T > G25855T > T28009C XFG.1.1.7 XFG.1.1 > A19326G,C29215T > G25855T > A21137G > C4084N,C9226N,C16308N +XFG.1.1.8 XFG.1.1 > A19326G,C29215T > G25855T > C10138T > C4898T > A14964G +TJ.1 XFG.1.1.8 > C28093T > G17193N +TJ.1.1 TJ.1 > G17193A > C4795T > G23599N > A13715G XFG.1.2 XFG.1 > T16224C,T25479C,C27416T > G21850T > C6696T > C16111T XFG.1.3 XFG.1 > T16224C,T25479C,C27416T > G21850T > C6696T > A27421G > C6730N,C11962N XFG.2 XFG > C20178T > C2065T,C6541T,T24283C,G29081T > A21137G XFG.2.1 XFG.2 > G25445T > C24771T > C8099N XFG.2.2 XFG.2 > G3302A > C25350T XFG.2.3 XFG.2 > G27621A XFG.2.3.1 XFG.2.3 > A22812C XFG.2.4 XFG.2 > C22088T > C19602N XFG.2.5 XFG.2 > A27853T XFG.2.5.1 XFG.2.5 > G14186A,G20342T > G3250T,G22567T,C28087T > A22812C +XFG.2.5.2 XFG.2.5 > G14186A,G20342T > C15368T XFG.2.6 XFG.2 > C29311T XFG.2.7 XFG.2 > C4897T XFG.2.7.1 XFG.2.7 > T1570C,T27546C > T18099A > A2410G XFG.2.7.2 XFG.2.7 > T14415C > C19572T > C25607T XFG.2.8 XFG.2 > C13426T > C26091T XFG.2.8.1 XFG.2.8 > C20930T > C29503G > A23598G XFG.2.9 XFG.2 > C25413T XFG.2.10 XFG.2 > G29702N > A10875C XFG.2.11 XFG.2 > T26491C,A26492T > T26497C XFG.2.12 XFG.2 > A5560G XFG.2.13 XFG.2 > C4456T XFG.2.13.1 XFG.2.13 > T16656C > G25630A XFG.3 XFG > C13608T XFG.3_10615 XFG.3 > C10615T XFG.3.1 XFG.3 > C6629T,A24813G > T17454N @@ -4286,38 +4345,40 @@ XFG.3.4.1 XFG.3.4 > T15762C > T23600C QF.1 XFG.3.4.1 > C3695T,C9979T > T22293C QF.1.1 QF.1 > G28090T QF.1.1.1 QF.1.1 > G13998A > C25083T QF.2 XFG.3.4.1 > C27812T QF.2.1 QF.2 > T898C > T23485A QF.2.2 QF.2 > G29044A QF.2.2.1 QF.2.2 > C25214T > A22538G SD.1 QF.2.2.1 > G20578T SD.1.1 SD.1 > T22792C > T7441C,C20148T QF.2.2.2 QF.2.2 > C25214T > C26873T QF.2.3 QF.2 > T898C > C13247T QF.2.4 QF.2 > T898C > C21811T QF.2.5 QF.2 > C23191T QF.2.6 QF.2 > C27849T +QF.2.6.1 QF.2.6 > A1977G,C15141T > C7267T,C27982T > G22899A QF.3 XFG.3.4.1 > C6027T QF.3.1 QF.3 > C26907T > C20148T > C7086T,A24813G > A2410N,C12970N,A29700N QF.4 XFG.3.4.1 > C28651T > C15960A QF.5 XFG.3.4.1 > C5284T QF.5.1 QF.5 > C23673T > C18175N QF.6 XFG.3.4.1 > G24434T QF.7 XFG.3.4.1 > G25606A QF.7.1 QF.7 > C23673T +QF.7.2 QF.7 > G28822T > A22151G > C23191N,C27513N XFG.3.4.2 XFG.3.4 > G1379A QT.1 XFG.3.4.2 > C3817T QT.1.1 QT.1 > C18377T > T23600C QT.1.2 QT.1 > C18377T > C6005A,C27752T QT.2 XFG.3.4.2 > T6023C,A23148G,G28681T > T28648N QT.3 XFG.3.4.2 > A23598G XFG.3.4.3 XFG.3.4 > T15762C > T24289A QS.1 XFG.3.4.3 > C8419T QS.2 XFG.3.4.3 > A23598G QS.3 XFG.3.4.3 > C25658T QS.4 XFG.3.4.3 > C1567T,G19656T,T23596C > G7756A > A22634T,T23781C > A21137N,C29555N XFG.3.4.4 XFG.3.4 > T15762C > T8566C > G15025A,G28727T > T26106N XFG.3.4.5 XFG.3.4 > T23600C > C25083T,G28287A XFG.3.4.6 XFG.3.4 > C15763T RN.1 XFG.3.4.6 > C26822T > C25708T > G1820A @@ -4399,79 +4460,90 @@ XFG.4.1.6 XFG.4.1 > C26894T XFG.4.1.7 XFG.4.1 > A5177G XFG.4.2 XFG.4 > A25134G XFG.4.3 XFG.4 > T28474A XFG.4.4 XFG.4 > G8017T XFG.4.5 XFG.4 > G22218A > A2825G XFG.5 XFG > C20178T > C10039T XFG.5.1 XFG.5 > C8152T > C6543T XFG.5.1.1 XFG.5.1 > C23625T,T25502C > C11300N,A19365N,C22570N XFG.5.1.2 XFG.5.1 > C853T > G25244T XFG.5.1.3 XFG.5.1 > C23601T XFG.5.1.4 XFG.5.1 > C2485T XFG.5.1.5 XFG.5.1 > C24034T > C22883A XFG.5.1.6 XFG.5.1 > G23624A XFG.5.1.7 XFG.5.1 > A23598G,A28081G > C29311N +TB.1 XFG.5.1.7 > C29311T > C1267A,C2189T,A10021G,C25609T,C25685T > C5284T > C1919T,G22865T > C1627N,T8477N,C29640N +TB.2 XFG.5.1.7 > C29311T > G28081A > G2577A,G25352T > T10084N,A16938N,G26834N XFG.5.1.8 XFG.5.1 > C12676T > C19524T > C13119T,G22865T > A7240N,C11300N,T19737N XFG.5.2 XFG.5 > A9079G XFG.5.2.1 XFG.5.2 > C23601T XFG.5.2.2 XFG.5.2 > T26972C XFG.5.2.3 XFG.5.2 > C23758T XFG.5.2.4 XFG.5.2 > A9204G XFG.5.2.5 XFG.5.2 > C6500T,C27590T,T27785C,C28344T,A29638G > C10456N,C26753N RM.1 XFG.5.2.5 > C10456T,C26753T > A25076G RM.2 XFG.5.2.5 > C10456T,C26753T > C21762T RM.3 XFG.5.2.5 > C10456T,C26753T > C22000A,A22005C,T23485A > C6762N XFG.5.2.6 XFG.5.2 > C12295T > C23673T XFG.5.2.7 XFG.5.2 > G25677T > T22566C,G22688T > C4582N,C5183N,T14907N,C25669N,C29065N XFG.5.2.8 XFG.5.2 > C23595T > G25352T > C9778N,C28290N XFG.5.3 XFG.5 > C22323T > C7195N,C29272N XFG.5.4 XFG.5 > T2698C XFG.5.4.1 XFG.5.4 > G25855T QW.1 XFG.5.4.1 > G1463A > A23592G QW.1.1 QW.1 > C7834T > C22088T XFG.5.4.2 XFG.5.4 > C1420T,T16695C,G24199A,T27484C,A29617G XFG.6 XFG > C20178T > C22883A XFG.6.1 XFG.6 > C24034T > C23595T XFG.6.2 XFG.6 > C24034T > T29409C XFG.6.2.1 XFG.6.2 > A22320G SC.1 XFG.6.2.1 > C10228T XFG.6.2.2 XFG.6.2 > A18585T SB.1 XFG.6.2.2 > T21414C SB.1.1 SB.1 > T1501A > G22865T +SB.1.1.1 SB.1.1 > C25469T > A23598G > C775N,A12928N,C24191N XFG.6.2.3 XFG.6.2 > C9226T SU.1 XFG.6.2.3 > A27474G > C1213T,G6647A > T23600C,C29118T > T11362N,C14649N XFG.6.3 XFG.6 > C24034T > T8359C XFG.6.3.1 XFG.6.3 > C3743T > G26730A > A1194C > C920T XFG.6.3.2 XFG.6.3 > C3743T > G26730A > A1194C > A23598G > C1594N XFG.6.3.3 XFG.6.3 > C3743T > G26730A > A1194C > G28904T > G22899A > C1528N,C2226N,C14120N SW.1 XFG.6.3.3 > C1528T > C2226T,C14120T > G22865T,C26964T > A27373N SW.2 XFG.6.3.3 > C1528T > C2226T,C14120T > A23148C > C3874N +SW.2.1 SW.2 > C3874T > T27138C > T28976G > T23485A > A691N,A12174N,T19551N,C20380N +SW.3 XFG.6.3.3 > C1528T > C2226T,C14120T > C21952T > C2334T,T23600C > C15240N,G18961N XFG.6.4 XFG.6 > C24034T > C8097T XFG.6.5 XFG.6 > C24034T > C23758T XFG.6.5.1 XFG.6.5 > C23601A > G3892N,C5178N,C25528N ST.1 XFG.6.5.1 > G3892A,C5178A,C25528T > T24703C > T12178C > G22865T > C23896N XFG.6.6 XFG.6 > C24034T > C5907T,C25282T,C25672T,A29621G > C25721T XFG.6.7 XFG.6 > C24034T > C17339T XFG.6.8 XFG.6 > C24034T > T6673C > C583T XFG.6.9 XFG.6 > C24034T > C27059T XFG.6.10 XFG.6 > C24034T > G28079T XFG.6.11 XFG.6 > C24034T > G18781A XFG.6.12 XFG.6 > C24034T > G2875A XFG.6.13 XFG.6 > C24034T > A23148C,T23158G +XFG.6.13.1 XFG.6.13 > C7819T > G23599C +TH.1 XFG.6.13.1 > G23587T > C3604N,C28651N +XFG.6.13.2 XFG.6.13 > C7819T > T12139C > T23600C > C2485T,C8760T +TG.1 XFG.6.13.2 > A22001G > A18862N XFG.6.14 XFG.6 > C24034T > C1684T > C1878T,T23600C > C29095N XFG.6.14.1 XFG.6.14 > C29095T > G22899A > A385N,C6730N,C15540N,A25450N +TC.1 XFG.6.14.1 > A385G,C6730T,C15540T,A25450G > C22855T > G24368C > A26319N +XFG.6.15 XFG.6 > C24034T > C15654T > T25496C > C23601T > C9319N,C9857N,C20844N XFG.7 XFG > C20178T > A28467T XFG.7.1 XFG.7 > A6351G,A9989G > A28268N XFG.7.1.1 XFG.7 > A6351G,A9989G > A28268C > A22010G,G28079T QZ.1 XFG.7.1.1 > C23625T XFG.7.1.2 XFG.7 > A6351G,A9989G > A28268C > A4822G > C19273T > G21830A,T22016C XFG.8 XFG > C20178T > C19170T > T17610C > A20163G XFG.8.1 XFG.8 > C15024T XFG.8.1.1 XFG.8.1 > G21724T,T22334C > A1124N XFG.8.2 XFG.8 > C5055T XFG.8.2.1 XFG.8.2 > C5796T > G24398A XFG.8.3 XFG.8 > C2857T XFG.8.4 XFG.8 > T18630C XFG.8.5 XFG.8 > C21306T XFG.9 XFG > C20178T > G7760A XFG.9.1 XFG.9 > A2500C,G24095T @@ -4503,65 +4575,72 @@ XFG.14.1.4 XFG.14.1 > C2485T,C19593T > C19983T XFG.14.1.5 XFG.14.1 > C2485T,C19593T > C10183T > C817T XFG.14.1.6 XFG.14.1 > C2485T,C19593T > G23675T XFG.14.1.7 XFG.14.1 > C2485T,C19593T > C13432T > C22599T XFG.14.1.8 XFG.14.1 > C2485T,C19593T > C14216T XFG.14.1.9 XFG.14.1 > C2485T,C19593T > C23673T > C27944T XFG.14.1.10 XFG.14.1 > C2485T,C19593T > A6058G XFG.14.2 XFG.14 > T17007C > G27754C > A23592T XFG.14.2.1 XFG.14.2 > C11345T,C25047T,T25496C > C2485N,T18696N,C24157N XFG.14.3 XFG.14 > T17007C > C313T > C934T > A4584G,C16376T,A22001G > C15763N XFG.14.4 XFG.14 > T17007C > G27754C > C25680T,C28744T > C10908T XFG.14.5 XFG.14 > T17007C > G27754C > C5002T,T10819C,G27870T > C5365T,C9166T > T29062N XFG.14.6 XFG.14 > T17007C > G27754C > C5884T XFG.14.7 XFG.14 > T17007C > G27754C > C17463T XFG.14.8 XFG.14 > T17007C > G27754C > C9565T +XFG.14.8.1 XFG.14.8 > A23157G > C6196N,C9803N,G21249N +TA.1 XFG.14.8.1 > C6196A,C9803T,G21249A > T23487G > G23401T > C2716N,C4927N,C7851N,A10323N,T14808N,G22899N XFG.14.9 XFG.14 > T17007C > G27754C > G24770A XFG.14.10 XFG.14 > T17007C > G27754C > T23487G XFG.15 XFG > C20178T > G18040T,C20762T, G23604A XFG.16 XFG > G4354A > G1784A XFG.17 XFG > A9970T XFG.17.1 XFG.17 > T21775A > T21738C > C5646N,C7086N XFG.17.2 XFG.17 > C3768T,C4202T,G4255A > A23598G > G3901N XFG.17.2.1 XFG.17 > C3768T,C4202T,G4255A > A23598G > G3901A > G22217A QQ.1 XFG.17.2.1 > G23593T,T29192C QQ.2 XFG.17.2.1 > T10771C > C11173T > A25439G > T1813N,C14178N QQ.3 XFG.17.2.1 > T10771C > C11173T > C4794T XFG.17.3 XFG.17 > G2731A > G22567T,C28528T XFG.17.4 XFG.17 > G22218A,A22595T > T1436N,C18888N,G29140N,G29414N XFG.18 XFG > C1960T,G24328T XFG.18.1 XFG.18 > G22567T > C11681N,C26058N XFG.19 XFG > C7113T,C14183T,C22419T > T6964N XFG.21 XFG > G20134T XFG.22 XFG > C20178T > G24434T XFG.22.1 XFG.22 > C449T > G22349T XFG.22.2 XFG.22 > C449T > C7834T XFG.22.3 XFG.22 > C449T > C29118T XFG.23 XFG > C4901A XFG.23.1 XFG.23 > C1288T > G22567T > T606N XFG.23.1.1 XFG.23.1 > T606C > C29137T > C28473A,C29367T RB.1 XFG.23.1.1 > T22191G RB.2 XFG.23.1.1 > C16173T > C23673T XFG.23.1.2 XFG.23.1 > T606C > C5944T,C18912T,C21676T,C29546T > C21811N XFG.23.1.3 XFG.23.1 > T606C > C29137T > C25083T RV.1 XFG.23.1.3 > G22899A -RV.1.1 RV.1 > C24865T > T14961C > A29700G +RV.1.1 RV.1 > C24865T > T14961C > A29700N +RV.1.1.1 RV.1.1 > A21420G > T16452C > G28727T RV.1.2 RV.1 > C29085T > G6563A RV.1.3 RV.1 > G4444A,G15982A > C6525T RV.1.4 RV.1 > G2534A,T18623C > C25378N +RV.1.5 RV.1 > C19027T > G25352T > A15873N RV.2 XFG.23.1.3 > T24412C RV.2.1 RV.2 > G25352T > C1314N,G2468N,A7429N +RV.2.1.1 RV.2.1 > C1314T,G2468A,A7429G > C15848T,G22899A +TK.1 RV.2.1.1 > A18000G > G23599N > A26148G +RV.3 XFG.23.1.3 > G28681T XFG.23.1.4 XFG.23.1 > T606C > C823A,C1780T,C8829T,C25658T,T27484C > T22334C XFG.23.1.5 XFG.23.1 > T606C > C3096T,C25613T > C15613N XFG.23.2 XFG.23 > C1288T > T23948C > C13548N,C23635N,G29179N XFG.24 XFG > C18928T > G21786T > C6286N,C11124N,C22264N,C29635N XFG.25 XFG > C18928T > C20178T > C22347T XFG.26 XFG > C20178T > G27948T XFG.26.1 XFG.26 > C6354T XFG.26.2 XFG.26 > C817T,C24421T XFG.26.2.1 XFG.26.2 > G24434T XFG.28 XFG > C20178T > C18306T XFG.29 XFG > C20178T > A13444G XFG.30 XFG > C20178T > C5183T XFG.31 XFG > C20178T > G5017A XFG.32 XFG > A22320G > C11572T > C20956A > T21941C > G4255N,G29554N XFG.33 XFG > T5045C @@ -4600,30 +4679,31 @@ XFJ.4.1 XFJ.4 > A27300T > T1501C XFJ.5 XFJ > C7044T,G22346T > A2356N XFJ.6 XFJ > C7006T XFJ.7 XFJ > T27212C XFJ.8 XFJ > C1919T > C20470A XFJ.8.1 XFJ.8 > A1565G,G25352T > C24310N,G28079N XFJ.9 XFJ > T2308C,T10273C XFJ.10 XFJ > C21682T XFK XEC > C7113T > C12616T > A13121T > G15372T > C17502T,G21776A,G22203T,A25590G XFL XEC > T24376C > C593T,C3505T,G24193T > C5534T,A5535T,G28378T XFM B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > G22599C > G22132T > C5239T, G12892A,T16600C,T21653C,A22107G, > C21627A > C22986T > T22896C > T22884G > C7869T,C8818T,T22930A,A23933G,C25844T,G27414A > G4504A,T4579A,T15207C,C21928T,A26555C XFN JN.1 > T23008N,T23010N > G24872T > T22928C > C23039G > G28884C > C25006T > C28291A > C21627A > G2060A > C10228T > G22865T,A27321G > C9365T,T16600C,T21653C,A22107G,G22132T,G22599C,G29543T XFN.1 XFN > T28600C XFN.2 XFN > G18781A XFN.2.1 B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,T22896A,G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T23008N,T23010N > G24872T > T22928C > C23039G > G28884C > C25006T > C28291A > C21627A > G2060A > C10228T > G22865T,A27321G > C9365T,T16600C,T21653C,A22107G,G22132T,G22599C,G29543T > G18781A > C28312T > C6026T,G14587T,A23013G > C11962N +XFN.3 XFN > C5183T, A22896C > C12085N,T12109N,C24916N,T28098N XFP B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > G22599C > G22132T > T21653C,A22107G,C22792T, > C21627A > T16600C > G12892A > C3784T,T4369C,C10954T,A23933G,G25494A,C28093T > C20384T,T22884G, T22896C ,T22930A,C22986T,G25599T,T28144C,C28603T XFP.1 XFP > A22991G XFP.1.1 XFP.1 > G1636C XFP.2 XFP > A2172G XFQ B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G, T28297C > C8818T,C22792T,A22893G > C21627A > C29409T > T22896G ,A23021G,C23039G,C23277T > T4684C,C6310T,C8980T,T17454C XFR JN.1.16.1 > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C, > C8818T, > C21627A > C6402T,C17436T,G22111T XFS B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G > C8818T, > C21627A > G24872T > C23039G > T22896G ,A24819G > C25925T > C6310T,G10642A,G15556A,C15678T,C22986T XFT B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C, > C8818T > C21627A > G24872T > C23039G > T22896G ,A24819G > G3939T > C10594T > C22120A,A23598G,C25162A,C25163A,C25925T XFT.1 XFT > C18060T > C22986T > C23731N,C29445N XFU B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G > C8818T > C21627A > T15207C,C21928T > G4504A,T4579A > T22884G, A22893A , T22896C > C11008T > A21026G,C23039G,T24703C,G24872T,C25006T,C28291A,G28884C,G29227T XFV B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C7869T,G12892A,T16600C,T21653C,A22107G, T28297C > C8818T,C22792T,A22893G > C21627A > C29409T > T8350C, T22896G ,A23021G,C23039G,C23277T > C13608T > C10615T > C23601T > C6449T > C4999T,G25477A XFV.1 XFV > C4794T > G22316A XFV.2 XFV > C23625T XFV.3 XFV > G19851A > G22899A XFV.4 XFV > G19851A > G29449A > C18329T @@ -4631,52 +4711,64 @@ XFV.6 XFV > G24947A XFW B.1.1 > A23063T > T22882G, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,T22896A,G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T23008N,T23010N > G24872T > T22928C > C23039G > G22599C > C22858T > C875A,A3908G,G12892A,T16600C,T22369C,G22865T, C22995C ,G26832T > C21627A,T21653C,A22012T,A22107G,G22132T XFW.1 XFW > C16457T, G23604A > C9724N,G21901N XFW.1.1 XFW.1 > C9724T,G21901A > A23588C XFW.1.1.1 XFW.1.1 > A2818G > C27509T > A23592G SR.1 XFW.1.1.1 > C5100T,C22082T > C6883N,T8323N XFY B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G, T28297C > C8818T,C22792T,A22893G > C21627A > T4214C,T8350C, T22896G ,A23021G,C23039G,C23277T > C20178T > C10039T > C8152T > C6543T > T4714C > G23593C,C28432T,T29164C XFY.1 XFY > A18077G > C4456T,A25067G XFY.2 XFY > C8626T XFY.3 XFY > C29272T XFZ B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T23008N,T23010N > G24872T > C7113T > T22928C > G22599C > C4999T > G1954A > T22896G ,C23039G > G22132T > G12892A,T16600C,C21627A,T21653C,A22107G > A23598G > G6647A > G6694A > G1148T,A22994G,C25006T,G25352T,G25552T,C26801T,C28291A,G28884C,C29272T XFZ.1 XFZ > A22486G > A22019G XFZ.2 XFZ > A28983G XFZ.2.1 XFZ.2 > A24999G > A2317N,A5097N,C17403N XFZ.3 XFZ > C19170T > T4330C > C2221T > A7864G > C5178T +XFZ.4 XFZ > C920T > T5479C,A19212G > T394C,C11962T,C18744T +XFZ.4.1 XFZ.4 > C23277T +XFZ.4.1.1 XFZ.4.1 > C1288T > A29122G +XFZ.4.1.2 XFZ.4.1 > C1288T > C6317T > C12025T > C23939T +XFZ.5 XFZ > C2037T +XFZ.5.1 XFZ.5 > C14877T > C6573T > C829T,C5986T > G22899A +XFZ.6 XFZ > A4117C > A22001C > C5407N,T14541N,A28795N XGA B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T, G12892A,T16600C,T21653C,A22107G, T28297C > C22792T,A22893G > C21627A > T22896G ,A23021G,C23039G,C23277T > T1501C,C19029T,C22883A,C24034T,G28913A XGA.1 XGA > C25578T XGA.2 XGA > C8140T XGA.3 XGA > C13647T,C21910T XGA.4 XGA > C5178T > G16197T > C18576N,C19152N,C23191N XGB B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C7869T,G12892A,T16600C,T21653C,A22107G, T28297C > C8818T,C22792T,A22893G > C21627A > C29409T > T8350C, T22896G ,A23021G,C23039G,C23277T > C13608T > C10615T > T28822G > C18885T > T15762C > T24289A > C8419T > C28737T > G1954A,T2074C,T3814C,C4999T XGC B.1.1 > A23063T > T22882G,C22995A, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G, T28297C > C8818T,C22792T,A22893G > C21627A > T22896G ,A23021G,C23039G,C23277T > C4586T,C9592T > G942A,T1477A,C20178T,T25514C XGD B.1.1 > A23063T > T22882G, C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A, A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T, C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C, G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > G22599C > G22132T > C5239T, G12892A,T16600C,T21653C,A22107G, > C21627A > C22986T > T22896C > T22884G > C22792T,T22930A,A23933G,C25844T,G27414A,T28297C > T20799C > C4893T > C3587T,A6277G > C13426T,T13890C,A22012C, C22995C ,C26058T XGE XFG > A23148C > G25352T > T17007C > G27754C > C23373T > C19593T > C2065T,C6541T XGF XFG > A23148C > G25352T > T17007C > G27754C > C23373T > C19593T > C10277T,A12490G,C13608T XGG XFG > C4214T , C8350T > C4586T,C9592T > A10978T,T16224C,A16687G,G20134T XGH XFG > C8350T > C9592T > C15660T > A10978T > C683T,C2334T,C2509T,T8350C,G15380T,C19029T miscBA1BA2Pre4321 B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > C4321T,C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G,C9866T > A22786C > A22688G > A29510C > C10198N > C22792N > A2832G > G22599N miscBA1BA2Post5386 B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G,C9866T > A22786C > A22688G > A29510C > C10198N > C22792N > A2832G > T5386G > G22599N miscBA1BA2Post8393 B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G,C9866T > A22786C > A22688G > A29510C > C10198N > C22792N > A2832G > T5386G > G8393A > G22599N XGJ XFG > G22217A,A23598G > T979A,C4534T,C6990T,T15939C XGK XFG > G22217A,A23598G > A5560G > C2065T,C5822T,C6541T,G7027T XGL XFG > G22217A,A23598G > A5560G > C6629T,C6723T,C7051T,T18765A XGM LP.8.1 > T17334G > C21627A > T21653C > T16600C > A23598G,G23856T > C4467T,C4893T,G7675T,C7869T,C8818T,C17436T,A20364G XGN XFG.3.5.2 > C10369T > A6944G > C20104T,A24819G,G24872T,C25083T,G25401A,C25693T,C25925T,C27649T XGP XFG > C4214T > C8350T > T7869C > T8818C > T5239C > G1954A,C4999T,C7113T > A12892G , C16600T > G27948T > C4893T,C6720T,C7735T,C9166A,A17460G,C18646T,C20178T,T27164C XGQ XFG > C4214T > C8350T > T7869C > T8818C > T5239C > G1954A,C4999T,C7113T > A12892G , C16600T > G27948T > A9274G,T17268C, T29409C XGR XFG > C4214T > C8350T > T7869C > T8818C > T5239C > G1954A,C4999T,C7113T > A12892G , C16600T > T2074C,G3403A,G3404A,T3814C,T5701G,G17334T,A18298G,C18885T,C25708T,C26822T,T28822G XGS XFG > C8350T > C9592T > A10978T > C3096T,C21928T, T29409C XGT JN.1 > T28297C > T22930A > G18492A ,A19326G,T21738C > T16342C,T17859C, T18894C > G15451A,C15738T, A15756T ,T15939C > T15573C,C16323T,C21627A,G22112A > C15960T,G22865T,C23039G > T11042G ,C11572T, T12789C , T12815C ,C12854T > C9866T,A10042G, A11727G ,C12473T,C12924T,G14290T > C7113T, G7842A , T8293C ,C8299T,A8390G, A8393G > T4214C,C29409T > C3096T, C5239T ,T15366C,A22995C,T23600C,G25947A,C27812T,T28822G XGU XFG.5.2 > C14318T > G2051A,C10778T,C11008T > T22792C,G22893A,A22994G,G23021A,T23277C,A23598G,G24872T,C25006T,G25352T,G25552T,C26801T,C28291A,C28297T,G28884C,C29272T, T29409C XGV XFG > C4214T > C8350T > T7869C > T8818C > T5239C > G1954A,C4999T,C7113T > C1348T,T3814C,T4723C,C5144T,G9646A,C10525T,C10969T,C12400T,C13608T,C13824T,C23188T,C24319T XGW XFG > C4214T > C8350T > T7869C > T8818C > T5239C ,C20178T > G1954A,C4999T,C7113T > C3141A,C4893T,C10228T,T14418C,A22320G,C24034T,A25067G,G26109T, T29409C XGY JN.1 > T28297C > T22930A > C7113T > G18492A ,A19326G,T21738C > T16342C,T17859C, T18894C > G15451A,C15738T, A15756T ,T15939C > T15573C,C16323T,C21627A,G22112A > C15960T,G22865T,C23039G > T11042G ,C11572T, T12789C , T12815C ,C12854T > C9866T,A10042G, A11727G ,C12473T,C12924T,G14290T > C6501A, G7842A , T8293C ,C8299T,A8390G, A8393G > C5878T,C28958A > C29409T > A22995C > T3431G , C3565T ,C3686T,C4683T,C11328T,A11947G,T13572C,C18306T,A21343G,G25617T XGZ XFG.3.4 > T13608C > T10615C > T23600C > G6533T,C23673T,G24040T,G25606A,C25614T +XHA RV.1.1.1 > C5812T > C606T , T1288C , A4901C > T508C,A687G,C2037T,G2577A,C6781T,A23598G, T24865C , T25083C ,G25352T,G26834T, T28727G , T29137C ,C29311T > G29700N +XHB RV.1.1.1 > C5812T > C606T , T1288C , A4901C > C1722T, C4214T ,C4586T +XHC RF.5 > G16914A > G21255T > T28678C,C29358T > G1463A, T1722C ,A1793G,T2698C,C2788T,T4214C, T4586C ,T8350C, A8863G , T9592C ,A17844G,C26537T +XHD XFG > T29409C > A28958C > C28432T,T29164C > C13608T > T15762C,C18885T > T9784C,C10615T,G17280T,C19263T,T23600C,G29032T +XHE PQ.16.1 > A19175G > C2706T,T25969C,C28603T,C29721T > A7089G,T11440A,C11747T,C12049T,G13651A,G18105T, C22792T , T22995C ,A23362G,T27484C,C27828A miscBA1BA2Pre10k B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > C26858T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9866N > A22786C > A22688G > A29510C > C10198T > C22792N > A2832G > T5386G > G8393A > G22599N miscBA1BA2Post13k B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > C15714T,C26060T > A20055G > C26858T > C21618T > C17410T > G27382C,A27383T,T27384C > A22786C > A22688G > A29510C > C10198N > C22792N > A2832G > T5386G > G8393A > A11537G > T13195C > G22599N miscBA2BA1PostSpike B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > G22578A,C22674T,T22679C,C22686T,A23040G,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T > G22992A,C22995A,A23013C,C25000T,A27259C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > T670G,G4184A,C4321T > C9534T > C12880T,C21618T > C17410T > C9344T,A9424G > A22786C > A22688G > C2790T > C10198N > A26530N > C9866T miscDeltaBA1Post4k B.1.1 > C21846T > C10029T > C15240T,C23854A,G23948T,C27807T > C21762T,C24130A,A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > G22578A,T22673C,C22674T,T22679C,C22686T,A23040G,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T > G22992A,C22995A,A23013C,C25000T,A27259C > A18163G,T22882G,C26577G,G26709A > G22813T > G8393A,A11537G > T13195C > G22898A,A26530G > C23202A > C24503T > G23048A > G4181T > G210N > C21595N > G22599N miscDeltaBA1Post11k B.1.1 > C21846T > C10029T > C15240T,C23854A,G23948T,C27807T > C21762T,C24130A,A28271T > T13195C,C23525T,T23599G,C23604A,C26270T,C28311T > C24503T,C25000T > C22995A,A23055G,A23063T,T23075C,C23202A,A24424T,T24469A,C25584T,A27259C > G22578A,T22673C,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > A26530G > G23048A > G22898A > C21595N > G4181T > C6402T,C7124T > C8986T,G9053T > G210N > A11332G > A11201G > G22599N miscBA.5.2CJ.1 BM.1.1 > T23031C > C1627T > T23018C miscBA.5BA.2.75 BA.5 > A28330N > A27038N > C3796N,C3927T,C4586N,C5183T,C9866N,A12444N,G15451N