File Changes for hiram

v503_preview2 to v503_base (2026-08-24 to 2026-08-31) v503

• src/hg/makeDb/doc/archaeaAsmHub/archaea.orderList.tsv
  • lines changed 163, context: html, text, full: html, text
    45470fd5cae828c4a2bf3d03f163791574d8a908 Mon Aug 24 20:35:27 2026 -0700
    RefSeq and VGP updates refs @29545
  • lines changed 2, context: html, text, full: html, text
    ea2d262f5f16f49380500fdf3a6758c14faf409b Tue Aug 25 20:01:33 2026 -0700
    adding two per user request refs @29545
• src/hg/makeDb/doc/bacteriaAsmHub/bacteria.orderList.tsv
  • lines changed 198, context: html, text, full: html, text
    45470fd5cae828c4a2bf3d03f163791574d8a908 Mon Aug 24 20:35:27 2026 -0700
    RefSeq and VGP updates refs @29545
• src/hg/makeDb/doc/birdsAsmHub/birds.orderList.tsv
  • lines changed 11, context: html, text, full: html, text
    45470fd5cae828c4a2bf3d03f163791574d8a908 Mon Aug 24 20:35:27 2026 -0700
    RefSeq and VGP updates refs @29545
• src/hg/makeDb/doc/fishAsmHub/fish.orderList.tsv
  • lines changed 29, context: html, text, full: html, text
    45470fd5cae828c4a2bf3d03f163791574d8a908 Mon Aug 24 20:35:27 2026 -0700
    RefSeq and VGP updates refs @29545
• src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv
  • lines changed 128, context: html, text, full: html, text
    45470fd5cae828c4a2bf3d03f163791574d8a908 Mon Aug 24 20:35:27 2026 -0700
    RefSeq and VGP updates refs @29545
• src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv
  • lines changed 76, context: html, text, full: html, text
    45470fd5cae828c4a2bf3d03f163791574d8a908 Mon Aug 24 20:35:27 2026 -0700
    RefSeq and VGP updates refs @29545
• src/hg/makeDb/doc/plantsAsmHub/plants.orderList.tsv
  • lines changed 6, context: html, text, full: html, text
    45470fd5cae828c4a2bf3d03f163791574d8a908 Mon Aug 24 20:35:27 2026 -0700
    RefSeq and VGP updates refs @29545
• src/hg/makeDb/doc/primatesAsmHub/primates.orderList.tsv
  • lines changed 4, context: html, text, full: html, text
    45470fd5cae828c4a2bf3d03f163791574d8a908 Mon Aug 24 20:35:27 2026 -0700
    RefSeq and VGP updates refs @29545
  • lines changed 12, context: html, text, full: html, text
    38021c2708cee8f71dec0a53d46bd10ad220fee5 Tue Aug 25 14:46:10 2026 -0700
    correct English name for Pan paniscus is bonobo refs #29545
• src/hg/makeDb/doc/vertebrateAsmHub/vertebrate.orderList.tsv
  • lines changed 27, context: html, text, full: html, text
    45470fd5cae828c4a2bf3d03f163791574d8a908 Mon Aug 24 20:35:27 2026 -0700
    RefSeq and VGP updates refs @29545
• src/hg/makeDb/trackDb/human/hg38/hg38.GCF_040939455.1.chainNet.ra
  • lines changed 49, context: html, text, full: html, text
    2207c70df00aea31175fb51b590a16d023467a08 Fri Aug 28 20:55:29 2026 -0700
    chainNet trackDb for hg38 GCF_040939455.1, otto liftOver
• src/hg/makeDb/trackDb/human/hg38/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    2207c70df00aea31175fb51b590a16d023467a08 Fri Aug 28 20:55:29 2026 -0700
    chainNet trackDb for hg38 GCF_040939455.1, otto liftOver
• src/hg/makeDb/trackDb/human/hs1/hs1.GCF_000165445.2.chainNet.ra
  • lines changed 49, context: html, text, full: html, text
    c164e63dca84ba536a55eef5c50288869f1c184d Fri Aug 28 20:55:38 2026 -0700
    chainNet trackDb for hs1 GCF_000165445.2, otto liftOver
• src/hg/makeDb/trackDb/human/hs1/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    c164e63dca84ba536a55eef5c50288869f1c184d Fri Aug 28 20:55:38 2026 -0700
    chainNet trackDb for hs1 GCF_000165445.2, otto liftOver
• src/hg/utils/automation/doAssemblyHub.pl
  • lines changed 11, context: html, text, full: html, text
    5776ff26d2da71f6cf65909b53a3e9238a522a7e Tue Aug 25 10:30:18 2026 -0700
    adding gcOnFly track development refs #35958
• src/hg/utils/automation/doTandemDup.pl
  • lines changed 3, context: html, text, full: html, text
    83b6d1578c7e378077c303080246ad9f34bb4f31 Wed Aug 26 16:54:05 2026 -0700
    can now use much less memory for kmerPairs.pl no redmine