cd41fd4fa0efadea0cd412d1a39e9479f3aa9832 braney Tue Sep 15 14:45:24 2026 -0700 A nightly start-up and pixel check for hgTracks, refs #37547 Two builds of hgTracks, one machine, one moment: how long each takes to start up and draw, and whether they draw the same pixels. Eight cells -- native and GenArk, few tracks and many, narrow and wide. compare.sh is the engine and takes any two builds, so the same test that runs nightly against master also answers "is this branch slower than genome-test, and does it still draw the same thing?" A build is just a directory holding hgTracks and hgRenderTracks, which `make compile` in hg/hgTracks produces without installing anything. nightly.sh is the cron wrapper, in the same shape as the Docent regression nightly: its own clone, --update resets it to origin/master, a mail every night whether or not anything failed, sixty days of logs, always exit 0. Its baseline is a rolling reference binary from the last green night rather than a golden image, because two binaries reading the same data at the same moment cannot disagree about pixels for a data reason -- ClinVar, GENCODE and the GenArk hubs all move underneath a saved render. Five things here were measured rather than assumed, and each one silently produces a wrong answer if it is left out. README.txt has them with the numbers; the short version: - TRACKDB_VERSION is baked into each trackDb cache dump's filename, so a build that bumped it starts with an empty cache and pays a full parse per cell. Each side gets its own cache dir and a per-cell warmup, or a one-time cost reads as a permanent regression. - Replaying a saved session's variables as a GET does not reproduce the session: composite _sel state and the default-visibility pass live in hgSession's load path. Against a 71-track session a flat replay drew 23 of them and invented four more. The fixtures are loaded with hgS_doLoadUrl instead. - Running the binaries directly needs an htdocs symlink beside trash, or freetype cannot find its font and every render dies. - Always running side A first is worth 4.5% to side B, from the caches A just warmed. The order alternates. - trackLog names every track hgTracks loaded, not the drawn rows -- a default hg38 view logs 563 and draws 21. Both are checked. Cold and warm carts are reported separately and deliberately. A one-shot render gives every request a fresh cart, so it measures only the first load; on #37547 that reported the branch slower while a persistent cart showed it faster, on the same binaries. Nothing is wired into the tree-wide build, for the same reason the Docent tests are not: these drive a real server and need the network. Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com> diff --git src/hg/utils/perfNightly/sessions/hg38-clinical.session src/hg/utils/perfNightly/sessions/hg38-clinical.session new file mode 100644 index 00000000000..96e9dd2ac38 --- /dev/null +++ src/hg/utils/perfNightly/sessions/hg38-clinical.session @@ -0,0 +1,754 @@ +European Server</li> +HLTOGAannotvsHLbosTau10v2 hide +HLTOGAannotvsHLeleMaxInd3Av2 hide +HLTOGAannotvsMm10v2 hide +LCRs hide +Max_counts_multiwig hide +TSS_activity_TPM hide +Total_counts_multiwig hide +_ 1685978094996 +abSplice hide +abelSv hide +affyExonArray hide +akbariIdmr hide +alphaGenome hide +altSeqLiftOverPsl hide +altSeqLiftOverPsl.baseColorDrawOpt diffBases +altSeqLiftOverPsl.indelDoubleInsert 1 +altSeqLiftOverPsl.indelPolyA 0 +altSeqLiftOverPsl.indelQueryInsert 1 +altSeqLiftOverPsl_sel 1 +avada pack +avada_imgOrd 36 +brainDevRegionsTissueCellType hide +c chr12 +cCREregistry hide +cCREs hide +cadd full +cadd.alwaysZero OFF +cadd.autoScale use 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