d75c53ececee5030dfea41a3ffe6f8b24065947c max Mon Sep 21 05:13:45 2026 -0700 trackDb: the five dead iframeUrl settings, refs #37595 The PDB ones framed http://www.pdb.org/pdb/explore, which is plain http on an https page and now redirects to a port that does not answer. Point them at https://www.rcsb.org/structure/, the URL wuhCor1 already uses. The four NCBI ones cannot be framed at all - nuccore sends X-Frame-Options: SAMEORIGIN - so they become a url instead, which gives the Outside Link that these tracks never had. While testing, the GenBank Chains details page on hg19 turned out to abort with "Input to %-s should be created with safe functions" before printing anything: its idInUrlSql used %-s. Quoted %s instead, and the page renders again. diff --git src/hg/makeDb/trackDb/human/trackDb.ra src/hg/makeDb/trackDb/human/trackDb.ra index 6f540a7d178..80cca616bca 100644 --- src/hg/makeDb/trackDb/human/trackDb.ra +++ src/hg/makeDb/trackDb/human/trackDb.ra @@ -2813,44 +2813,44 @@ visibility hide color 100,50,0 altColor 255,240,200 spectrum on type chain hg16 otherDb hg16 track gbDnaBigChain shortLabel GenBank Chains longLabel GenBank DNA Sequences >5kbp Chained group x visibility hide color 100,50,0 altColor 255,240,200 type chain genbank -iframeUrl https://www.ncbi.nlm.nih.gov/nuccore/$$ -iframeOptions height='600' width='1024' -idInUrlSql SELECT qName from gbDnaBigChain where id=%-s +# a link, not an iframe: NCBI sends X-Frame-Options: SAMEORIGIN, so nuccore cannot be framed +url https://www.ncbi.nlm.nih.gov/nuccore/$$ +idInUrlSql SELECT qName from gbDnaBigChain where id='%s' track gbSmall shortLabel GenBank Small longLabel GenBank Short DNA Sequences <5kbp group x visibility hide color 100,50,0 altColor 255,240,200 type psl -iframeUrl https://www.ncbi.nlm.nih.gov/nuccore/$$ -iframeOptions height='600' width='1024' +# a link, not an iframe: NCBI sends X-Frame-Options: SAMEORIGIN, so nuccore cannot be framed +url https://www.ncbi.nlm.nih.gov/nuccore/$$ #idInUrlSql SELECT qName from gbDnaBigChain where id=%-s track affyTranscription shortLabel Transcription longLabel Affy. SK-N-AS Transcript Abundance group expression visibility hide autoScale Off color 175,150,128 altColor 255,128,0 maxHeightPixels 128:36:16 graphTypeDefault Bar gridDefault OFF chromosomes chr6,chr7,chr13,chr14,chr19,chr20,chr21,chr22,chrX,chrY viewLimits 0:150