cc23b76a1f2c7dc6a29c227661bfb0ce4d20eb54 lrnassar Fri Sep 4 13:43:48 2026 -0700 BLAT page polish from QA: Load example button, corrected input limits, wording fixes. refs #37996 Load example is a chip-style button with a mouseover instead of a hyperlink. Removed the Show input limits modal; corrected the limits in hgTracksHelp.html, stale since 2013 (DNA is 75,000 bases per sequence and 187,500 combined, protein and translated 10,000 and 25,000), added a #blatLimits anchor and pointed the two over-limit BLAT warnings and the form at it. Genome selector: section title Target assembly, type-to-search hint in the dropdown, Shortcuts: label, input and Query type select sized to match. Similar tools sidebar uses house-style hyphens and corrects the findMotif name and description. Share and rename text now states link lifetimes accurately (snapshot links last years, only sessions are permanent). Alignment page buttons match .gbPill, summary strip spacing fixed, New BLAT search button demoted from primary. Documents blatResultsGroup in ex.hg.conf. diff --git src/product/ex.hg.conf src/product/ex.hg.conf index 039805e4bb1..47c6d98e618 100644 --- src/product/ex.hg.conf +++ src/product/ex.hg.conf @@ -672,30 +672,36 @@ # Suppress creation of thumbnails and associated warnings. Must # be set to "on" to disable thumbnail creation. #sessionThumbnail.suppress=on # deactivate the hgMirror CGI on this machine # hgMirror is currently only supported on the GBIB VirtualMachine # default is 0 # allowHgMirror=1 # Turn off option to save blat results as a custom track. Default is on. # useBlatBigPsl=off # number of sequences allowed to submit to on-line blat, default is 25 # hgBlat.maxSequenceCount=25 +# Put BLAT result custom tracks into their own "BLAT Results" track group directly below +# Custom Tracks, with a "Delete all" button on the group, and give headerless queries a +# clearer default name (query size + top hit gene, e.g. "400bp SOD1"). Off by default: +# results stay in the Custom Tracks group with the classic "blat YourSeq" names. +# blatResultsGroup=on + # What to do with earlier BLAT result custom tracks when a new BLAT search adds one, so the # user is not confused about which results are current. Values: keep (default, do nothing) | # hide (leave earlier BLAT tracks in the session but set them to hide) | delete (remove them # from the session). Only affects tracks BLAT created (tagged blatResult=on). # blatOldTracks=keep # Offer a "Keep only last search" checkbox on the BLAT search form. Off by default: results # accumulate as always. When set to on, a user can check the box to have each new BLAT search # remove their earlier BLAT result tracks (tagged blatResult=on); the choice is stored in the # cart variable blatOnlyLatest and remembered per browser. # blatOnlyLatestCheckbox=on # Advertise the new BLAT results table page with a banner on the classic results page. # Default is off (the new page is still under test); set to on to show the invitation. # blatNewPageBanner=on