b6a47b7ad276b0fc44d624d9038edb096bb52c0c brianlee Wed Sep 9 15:05:26 2026 -0700 Adding MiNND Year4 milestone items to timeline diff --git src/hg/cirm/gateway/htdocs/sspsygeneTimeline.html src/hg/cirm/gateway/htdocs/sspsygeneTimeline.html index f829b38b0c9..1afecb7548c 100755 --- src/hg/cirm/gateway/htdocs/sspsygeneTimeline.html +++ src/hg/cirm/gateway/htdocs/sspsygeneTimeline.html @@ -125,57 +125,81 @@ Start Grant Year 3 :milestone, year3_minnd, 2025-03-31, 0d Start Grant Year 4 :milestone, year4_minnd, 2026-03-31, 0d Start Grant Year 5 :milestone, m1, 2027-03-31, 0d click year3_minnd href "https://docs.google.com/spreadsheets/d/1GNrJaIjs6nPlFY4j2AlZSlTDf2-mi17d/edit?gid=1137576441#gid=1137576441&range=J1:M34" click year4_minnd href "https://docs.google.com/spreadsheets/d/1XjUJYSy8xPxKOBBOgHEdzbzNFG_cqqLn/edit?gid=1137576441#gid=1137576441&range=N1" section Aim 1 section Aim 2 Submit scRNA-seq data for 72 edited lines (3×23 gene mutations + 1 NTC) from last quarter. : active, milestone, ADGC2_J_11, 2025-06-30, 0d Submit scRNA-seq data for 72 edited lines (3×23 mutations + 1 NTC) & L1-L3 datasets (fastq, RDS, Excel) from last year. : crit, milestone, ADGC2_K_11, 2025-09-30, 0d Submit scRNA-seq data for 72 edited lines (3×23 mutations + 1 NTC) & L1-L3 datasets (fastq, RDS, Excel) from last quarter : active, milestone, ADGC2_L_11, 2025-12-31, 0d Submit scRNA-seq data for 72 edited lines (3×23 mutations + 1 NTC) & L1-L3 datasets (fastq, RDS, Excel) from last quarter : crit, milestone, ADGC2_M_11, 2026-03-31, 0d + Submit scRNA-seq L0 for 72 lines (3×23 + 1 NTC) : crit, milestone, ADGC2_Y4_N_11, 2026-06-30, 0d + Submit scRNA-seq L0 for 72 lines & begin L1-L3 upload (fastq, RDS, Excel) : crit, milestone, ADGC2_Y4_O_11, 2026-09-30, 0d + Submit scRNA-seq L0 for 72 lines & continue L1-L3 upload (fastq, RDS, Excel) : crit, milestone, ADGC2_Y4_P_11, 2026-12-31, 0d + Submit scRNA-seq L0 for 72 lines & continue L1-L3 upload (fastq, RDS, Excel) : crit, milestone, ADGC2_Y4_Q_11, 2027-03-31, 0d Submit Imaging of 72 iPSC lines (3×23 mutations + 1 NTC) & prior quarter L1-L3 : active, milestone, ADGC2_J_12, 2025-06-30, 0d Submit Imaging of 72 iPSC lines (3×23 mutations + 1 NTC) & prior quarter L1-L3 : crit, milestone, ADGC2_K_12, 2025-09-30, 0d Submit Imaging of 72 iPSC lines (3×23 mutations + 1 NTC) & prior quarter L1-L3 : crit, milestone, ADGC2_L_12, 2025-12-31, 0d Submit Imaging of 72 iPSC lines (3×23 mutations + 1 NTC) & prior quarter L1-L3 : crit, milestone, ADGC2_M_12, 2026-03-31, 0d + Submit Imaging L0 for 72 lines (3×23 + 1 NTC) : crit, milestone, ADGC2_Y4_N_12, 2026-06-30, 0d + Submit Imaging L0 for 72 lines & begin L1-L3 original-analysis upload : crit, milestone, ADGC2_Y4_O_12, 2026-09-30, 0d + Submit Imaging L0 for 72 lines & continue L1-L3 original-analysis upload : crit, milestone, ADGC2_Y4_P_12, 2026-12-31, 0d + Submit Imaging L0 for 72 lines & continue L1-L3 original-analysis upload : crit, milestone, ADGC2_Y4_Q_12, 2027-03-31, 0d CODEX 3x data to BIL, generate LoF variants in 1-2 new lines : crit, milestone, ADGC2_M_13, 2026-03-31, 0d - + CODEX submit imaging from first 3 coverslips to BIL; LoF variants in 1-2 more lines : crit, milestone, ADGC2_Y4_Q_13, 2027-03-31, 0d section Aim 3 Submit Synaptic Optical Imaging of 72 iPSC (3×23 mutations + 1 NTC) : active, milestone, ADGC2_J_19, 2025-06-30, 0d Submit Synaptic Optical Imaging of 72 iPSC (3×23 mutations + 1 NTC) : crit, milestone, ADGC2_K_19, 2025-09-30, 0d Begin to upload L1-L3 analysis for data from previous year : crit, milestone, ADGC2_K_20, 2025-09-30, 0d Submit Synaptic Optical Imaging of 72 iPSC (3×23 mutations + 1 NTC) : crit, milestone, ADGC2_L_19, 2025-12-31, 0d Continue upload L1-L3 analysis for data from previous year : crit, milestone, ADGC2_L_20, 2025-12-31, 0d Submit Synaptic Optical Imaging of 72 iPSC (3×23 mutations + 1 NTC) : crit, milestone, ADGC2_M_19, 2026-03-31, 0d Continue upload L1-L3 analysis for data from previous year : crit, milestone, ADGC2_M_20, 2026-03-31, 0d + Submit Synaptic Optical Imaging of 72 lines (3×23 + 1 NTC) L0 : crit, milestone, ADGC2_Y4_N_19, 2026-06-30, 0d + Continue upload L1-L3 original analysis from prior quarter : crit, milestone, ADGC2_Y4_N_20, 2026-06-30, 0d + Submit Synaptic Optical Imaging of 72 lines (3×23 + 1 NTC) L0 : crit, milestone, ADGC2_Y4_O_19, 2026-09-30, 0d + Continue upload L1-L3 original analysis from prior quarter : crit, milestone, ADGC2_Y4_O_20, 2026-09-30, 0d + Submit Synaptic Optical Imaging of 72 lines (3×23 + 1 NTC) L0 : crit, milestone, ADGC2_Y4_P_19, 2026-12-31, 0d + Continue upload L1-L3 original analysis from prior quarter : crit, milestone, ADGC2_Y4_P_20, 2026-12-31, 0d + Submit Synaptic Optical Imaging of 72 lines (3×23 + 1 NTC) L0 : crit, milestone, ADGC2_Y4_Q_19, 2027-03-31, 0d + Continue upload L1-L3 original analysis from prior quarter : crit, milestone, ADGC2_Y4_Q_20, 2027-03-31, 0d section Aim4 Submit PatchSeq data for 192 NTC lines L0 data : crit, milestone, ADGC2_J_27, 2025-06-30, 0d Submit PatchSeq data for 192 NTC lines L0 data : crit, milestone, ADGC2_K_27, 2025-09-30, 0d Submit PatchSeq data for 192 NTC lines L0 data : active, milestone, ADGC2_L_27, 2025-12-31, 0d Submit PatchSeq data for 192 NTC lines L0 data : active, milestone, ADGC2_M_27, 2026-03-31, 0d + Submit PatchSeq data for 192 NTC lines L0 data : crit, milestone, ADGC2_Y4_N_27, 2026-06-30, 0d + Submit PatchSeq data for 192 NTC lines L0 data : crit, milestone, ADGC2_Y4_O_27, 2026-09-30, 0d + Submit PatchSeq data for 192 NTC lines L0 data : crit, milestone, ADGC2_Y4_P_27, 2026-12-31, 0d + Submit PatchSeq data for 192 NTC lines L0 data : crit, milestone, ADGC2_Y4_Q_27, 2027-03-31, 0d + Submit PatchSeq data for 192 cells L1-L3 : crit, milestone, ADGC2_K_28, 2025-09-30, 0d Submit PatchSeq data for 192 cells L1-L3 : crit, milestone, ADGC2_L_28, 2025-12-31, 0d Submit PatchSeq data for 192 cells L1-L3 : crit, milestone, ADGC2_M_28, 2026-03-31, 0d - + Submit PatchSeq data for 192 cells L1-L3 : crit, milestone, ADGC2_Y4_N_28, 2026-06-30, 0d + Submit PatchSeq data for 192 cells L1-L3 : crit, milestone, ADGC2_Y4_O_28, 2026-09-30, 0d + Submit PatchSeq data for 192 cells L1-L3 : crit, milestone, ADGC2_Y4_P_28, 2026-12-31, 0d + Submit PatchSeq data for 192 cells L1-L3 : crit, milestone, ADGC2_Y4_Q_28, 2027-03-31, 0d </pre> </div> </div> <a name="ADGC3"></a> <!-- Start of ADGC3 Henry Gantt Chart--> <div class="cirm-page-title back-light-blue"><h5 class="cirm-page-title-text">ADGC3 Yale timeline</h5></div> <div class="row"> <div class="col-md-12"> <pre class="mermaid"> gantt dateFormat YYYY-MM-DD axisFormat %Y-Q%q title ADGC3 Yale [RM1MH132648]