9b01cd88c13e54301f06f7ae447f5cf071961a61
jcasper
  Sun Sep 27 01:11:16 2026 -0700
Installing updated hg.conf files from UCSC servers

diff --git confs/hgwbeta.hg.conf confs/hgwbeta.hg.conf
index a3b4bd01c31..0a24ad3401d 100644
--- confs/hgwbeta.hg.conf
+++ confs/hgwbeta.hg.conf
@@ -281,45 +281,55 @@
 
 # Increases the number of items that can be queried from a BAM file
 BAMMaxItems=60000
 
 # new flag for testing rm32751 turn on automatic creation of custom tracks from hgBlat results.
 autoBlatBigPsl=on
 
 # BLAT shows locus name of the match #35993
 blatShowLocus=off
 
 # Enables genark hubs to appear in assembly dropdowns for hgConvert/hgLiftOver
 genarkLiftOver=on
 
 # Enables the QuickLift checkbox on hgConvert
 browser.quickLift=on
+# Lets QuickLift lift alignment tracks too: psl, bigPsl, chain, bigChain, maf,
+# bigMaf and wigMaf.  Refs #38249.
+browser.quickLiftAlignments=on
 # Additional settings for QuickLift
 quickLift.lengthLimit=100000
 quickLift.insColor=64,127,0,64
 quickLift.delColor=0,0,127,64
 quickLift.doubleColor=127,127,127,64
 quickLift.mismatchColor=255,0,0,64
 
 # allow most tracks to have an override color that ignores trackDb and the item coloring
 showColorPicker=on
 
 # Show chromosome aliases on hgTracks
 showAliases=on
 
 parallelDraw.threads=8
 
 # Set a limit on how many IP addresses can use the same hguid before a forced captcha check, see #37494
 hguidIpTracking.enabled=on
 
 # Allow changing of item color via right click
 canColorItems=on
 
 # Enable passwordless email-link sign-in and the change-email option (genome-test), ticket 37929
 login.emailLink=on
 
 # Enables the password reveal button in hgLogin, refs #37921
 login.pwdEyeIcon=on
 
 # Enables the redesigned hgc alignment viewer, refs #37893
 modernAlignPage=on
 
+# Highlight the MANE Select/Plus Clinical transcript in its own section on
+# the hgSearch disambiguation page, refs #38285
+showManeInSearch=on
+
+showTxCodonNumbers=on
+
+login.recovEmailChange=on