cf9cfcd463d40a868f8ee73dead17ff8071dce2f max Fri Sep 25 03:00:20 2026 -0700 CRISPR tracks: expose colorFields dropdown to color guides by off-target specificity (MIT score) or by Moreno-Mateos efficiency, as alternatives to the default Doench/Fusi-based itemRgb color. The bigBed already carries these as the _specColor and _crisprScanColor extra fields; no data rebuild needed. diff --git src/hg/makeDb/trackDb/crispr10K.ra src/hg/makeDb/trackDb/crispr10K.ra index 6dc72cdca1a..f13bd60127b 100644 --- src/hg/makeDb/trackDb/crispr10K.ra +++ src/hg/makeDb/trackDb/crispr10K.ra @@ -17,16 +17,17 @@ html crispr10K track crispr10KTargets shortLabel CRISPR Targets 10K longLabel CRISPR/Cas9 -NGG Targets (exons +/- 10,000 bp) visibility pack type bigBed 9 + itemRgb on parent crispr10K mouseOverField _mouseOver scoreLabel MIT Guide Specificity Score # details page is not using a mysql table but a tab-sep file detailsTabUrls _offset=/gbdb/$db/crispr10K/crisprDetails.tab url http://crispor.gi.ucsc.edu/crispor.py?org=$D&pos=$S:${&pam=NGG urlLabel Click here to show this guide on Crispor.org, with expression oligos, validation primers and more + colorFields default="Efficiency (Doench/Fusi)" _specColor="Off-target specificity (MIT score)" _crisprScanColor="Efficiency (Moreno-Mateos)" html crispr10K