7aa59c8f6afbda4c2157d3990b2bbc48a39cac63
max
  Fri Sep 25 02:48:31 2026 -0700
varFreqs: add SFARI SPARK 45k WGS subtracks. sfariSparkWgs45k is built from the release's AF table (AN estimated, singletons dropped); sfariSparkWgs45kAsd is built from the genotype pVCFs with ASD/non-ASD counts, for now only the DSCAM locus while the genome-wide parasol run finishes, refs #38424

diff --git src/hg/makeDb/trackDb/human/varFreqs.ra src/hg/makeDb/trackDb/human/varFreqs.ra
index 3b8fc94e206..54e16c8ee5c 100644
--- src/hg/makeDb/trackDb/human/varFreqs.ra
+++ src/hg/makeDb/trackDb/human/varFreqs.ra
@@ -1349,30 +1349,73 @@
         visibility hide
         priority 26
 
         track sfariSparkWgs
         shortLabel SFARI SPARK 12k WGS
         longLabel SNV Frequencies: SFARI SPARK - 12,519 WGS
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/_sfari/wgs_12519_genome.deepvariant.norm.vcf.gz
         dataVersion iWGS v1.1
         visibility hide
         priority 25
         html sfariSparkExomes
         tableBrowser off
 
+        track sfariSparkWgs45k
+        shortLabel SFARI SPARK 45k WGS
+        longLabel SNV Frequencies: SFARI SPARK - 45,178 WGS, August 2026 release, AC>=2
+        type vcfTabix
+        parent varFreqs on
+        bigDataUrl /gbdb/$D/varFreqs/_sfari/sparkWgs45k.vcf.gz
+        dataVersion SPARK WGS 2026_08
+        visibility hide
+        priority 24
+        html sfariSparkExomes
+        tableBrowser off
+
+        track sfariSparkWgs45kAsd
+        shortLabel SFARI SPARK 45k WGS ASD
+        longLabel SNV Frequencies: SFARI SPARK - 45,178 WGS, August 2026 release, from genotypes, ASD/non-ASD counts
+        type vcfTabix
+        parent varFreqs on
+        bigDataUrl /gbdb/$D/varFreqs/_sfari/sparkWgs45kAsd.vcf.gz
+        dataVersion SPARK WGS 2026_08
+        visibility hide
+        priority 24.1
+        html sfariSparkExomes
+        tableBrowser off
+        filter.AF 0:1
+        filterByRange.AF on
+        filterLimits.AF 0:1
+        filterLabel.AF Allele frequency, all
+        filter.AF_AUT 0:1
+        filterByRange.AF_AUT on
+        filterLimits.AF_AUT 0:1
+        filterLabel.AF_AUT Allele frequency, autistic
+        filter.AF_NON_AUT 0:1
+        filterByRange.AF_NON_AUT on
+        filterLimits.AF_NON_AUT 0:1
+        filterLabel.AF_NON_AUT Allele frequency, non-autistic
+        filter.VARLEN -1000:1000
+        filterByRange.VARLEN on
+        filterLimits.VARLEN -1000:1000
+        filterLabel.VARLEN Length change in bp (ALT minus REF, negative for deletions)
+        filterText.BCSQ *
+        filterType.BCSQ wildcard
+        filterLabel.BCSQ Predicted consequence (e.g. *missense*, *frameshift*, *stop_gained*)
+
         #track mcps
         #shortLabel Mexico City Prospective Study 10k WGS+141k WES
         #longLabel SNV Frequencies: Mexico City Prospective Study (MCPS)
         #tableBrowser off
         #parent varFreqs on
         #bigDataUrl /gbdb/$D/varFreqs/mcps/mcps.freq.vcf.gz
         #visibility pack
         #type vcfTabix
         #dataVersion May 2023 (v1.2.0)
         #priority 3
 
         track tommo60kjpn
         shortLabel Japan ToMMo 61k WGS
         longLabel SNV Frequencies: Japan 61k - ToMMo SNV+Indels
         type vcfTabix