795eb665503d576544d47e863b6a4d30df48b568 mspeir Sat Sep 26 18:48:11 2026 -0700 point three help pages at public hosts instead of genome-test, refs #37641 diff --git src/hg/htdocs/goldenPath/help/api.html src/hg/htdocs/goldenPath/help/api.html index b7b19985920..adde9db564a 100755 --- src/hg/htdocs/goldenPath/help/api.html +++ src/hg/htdocs/goldenPath/help/api.html @@ -412,31 +412,31 @@ <li><a href='https://api.genome.ucsc.edu/getData/sequence?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;chrom=chr1;start=4321;end=5678' target=_blank>Get DNA sequence from specified chromosome and start,end coordinates in an assembly hub genome</a> - <br><b>api.genome.ucsc.edu/getData/sequence?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;chrom=chr1;start=4321;end=5678</b></li> <li><a href='https://api.genome.ucsc.edu/getData/track?genome=hg38;track=gold;maxItemsOutput=100' target=_blank>Get track data for specified track in UCSC database genome</a> - <br><b>api.genome.ucsc.edu/getData/track?genome=hg38;track=gold;maxItemsOutput=100</b></li> <li><a href='https://api.genome.ucsc.edu/getData/track?genome=hg38;track=gold;chrom=chrM' target=_blank>Get track data for specified track and chromosome in UCSC database genome</a> - <br><b>api.genome.ucsc.edu/getData/track?genome=hg38;track=gold;chrom=chrM</b></li> <li><a href='https://api.genome.ucsc.edu/getData/track?genome=hg38;track=gold;chrom=chr1;start=47000;end=48000' target=_blank>Get track data for specified track, chromosome and start,end coordinates in UCSC database genome</a> - <br><b>api.genome.ucsc.edu/getData/track?genome=hg38;track=gold;chrom=chr1;start=47000;end=48000</b></li> <li><a href='https://api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=assembly' target=_blank>Get track data for specified track in an assembly hub genome</a> - <br><b>api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=assembly</b></li> -<li><a href='https://api.genome.ucsc.edu/getData/track?hubUrl=http://genome-test.gi.ucsc.edu/~hiram/hubs/Plants/hub.txt;genome=araTha1;track=assembly;chrom=chrCp' +<li><a href='https://api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=assembly;chrom=chr1' target=_blank>Get track data for specified track and chromosome in an assembly hub genome</a> - <br><b>api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=assembly;chrom=chr1</b></li> <li><a href='https://api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=ensGene' target=_blank>Get track data for specified track in a track hub</a> - <br><b>api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=ensGene</b></li> <li><a href='https://api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=ensGene;chrom=chr1' target=_blank>Get track data for specified track and chromosome in a track hub</a> - <br><b>api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=ensGene;chrom=chr1</b></li> <li><a href='https://api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=gc5Base;chrom=chr1;start=4321;end=5678' target=_blank>Wiggle track data for specified track, chromosome with start and end limits in an assembly hub genome</a> - <br><b>api.genome.ucsc.edu/getData/track?hubUrl=http://hgdownload.gi.ucsc.edu/hubs/mouseStrains/hub.txt;genome=CAST_EiJ;track=gc5Base;chrom=chr1;start=4321;end=5678</b></li> <li><a href='https://api.genome.ucsc.edu/getData/track?genome=galGal6;track=gc5BaseBw;maxItemsOutput=100' target=_blank>Wiggle track data for specified track in a UCSC database genome</a> - <br><b>api.genome.ucsc.edu/getData/track?genome=galGal6;track=gc5BaseBw;maxItemsOutput=100</b></li> <li><a href='https://api.genome.ucsc.edu/getData/track?genome=galGal6;track=ncbiRefSeqOther;chrom=chr1;start=750000;end=55700000'