1225a489c7de73798ed0051d2141d876a3969486 mspeir Sat Sep 26 18:55:01 2026 -0700 remove orphaned inc/dataApi.html, superseded by goldenPath/help/api.html, refs #37641 diff --git src/hg/htdocs/inc/dataApi.html src/hg/htdocs/inc/dataApi.html deleted file mode 100644 index e8292f7a04a..00000000000 --- src/hg/htdocs/inc/dataApi.html +++ /dev/null @@ -1,42 +0,0 @@ -<h1>JSON data API interface to U.C. Santa Cruz genome browser data</h1> -<h2>Data access URL: <em>https://hgwdev-api.ucsc.edu/</em></h2> -<h3>Endpoint functions:</h3> -<ul> -<li>/list/...</li> -<li><ol> -<li>/list/publicHubs - list public hubs</li> -<li>/list/ucscGenomes - list UCSC database genomes</li> -<li>/list/hubGenomes - list genomes from specified hub</li> -<li>/list/tracks - list data tracks available in specified hub or database genome</li> -<li>/list/chromosomes - list chromosomes from specified data track in specified hub or database genome</li> -</ol></li> -<li>/getData/...</li> -<li><ol> -<li>/getData/sequence - return sequence from specified hub or database genome</li> -<li>/getData/track - return data from specified track in hub or database genome</li> -</ol></li> -</ul> -<h3>Parameters to endpoint functions:</h3> -<ul> -<li>hubUrl=<url> - specify track hub or assembly hub URL</li> -<li>genome=<name> - specify genome assemby in track or assembly hub</li> -<li>db=<ucscDb> - specify database (aka genome assembly) in UCSC genome browser</li> -<li>track=<trackName> - specify data track in hub or UCSC database genome assembly</li> -<li>chrom=<chrN> - specify chromosome name for sequence or track data</li> -<li>start=<123> - specify start coordinate (0 relative) for data from track or sequence retrieval</li> -<li>end=<456> - specify end coordinate (1 relative) for data from track or sequence retrieval</li> -<li>(see also: <a href='https://genome-blog.gi.ucsc.edu/blog/the-ucsc-genome-browser-coordinate-counting-systems/' target=_blank>UCSC browser coordinate counting systems)</a></li> -<li>maxItemsOutput=1000 - limit number of items to output, default: 1,000, maximum limit: 1,000,000</li> -</ul> - -<h3>Supported track types, at this time (April 2019), for getData functions:</h3> -<ul> -<li>bed</li> -<li>bigBed</li> -<li>bigGenePred</li> -<li>bigNarrowPeak</li> -<li>bigWig</li> -<li>broadPeak</li> -<li>narrowPeak</li> -<li>wig</li> -</ul>