e412ddfeae024619e58d55cc39835372c41b1622 hiram Tue Jun 23 16:24:35 2026 -0700 verify liftOverChain and quickLiftChain have identical fromDb,toDb pairs refs #36233 diff --git src/hg/utils/otto/otto.crontab src/hg/utils/otto/otto.crontab index 09b05927c5b..fb35ed69ccd 100644 --- src/hg/utils/otto/otto.crontab +++ src/hg/utils/otto/otto.crontab @@ -122,30 +122,34 @@ 37 10 * * 2 /hive/data/inside/GenArk/updateHgcentral.sh makeItSo ##### this script is making a listing that is used by the pushRR.sh script. ##### this takes a significant amount of time to run, 2 or 3 hours. ##### Needs to be done before the pushRR.sh script below is running at 01:03 58 18 * * * /hive/data/inside/GenArk/pushRR/devList.sh ##### see also, in the source tree: src/hg/utils/otto/genArk/pushRR/README.txt # push out the /gbdb/hubs/GC[AF]/ hierarchy to: # hgwbeta hgw0 hgw1 hgw2 euroNode # There is an equivalent 'pull' script running on the asiaNode # as of 2025-07-24 this script now protects itself from overrunning itself # with a lock file. It will email when it is doing that. 03 01 * * * /hive/data/inside/GenArk/pushRR/pushRR.sh +### verify liftOverChain and quickLiftChain tables have +### identical fromDb,toDb pairs: +11 3 * * * /hive/data/inside/GenArk/checkChainTables/toFromCount.sh + #NCBI RefSeq 23 8 * * 3 /hive/data/outside/otto/ncbiRefSeq/ottoNcbiRefSeq.sh #Index page public session thumbnails update MAILTO=otto-group@ucsc.edu 11 1 * * 4 /cluster/software/bin/python /cluster/bin/scripts/buildPublicSessionThumbnailsIndexPage.py /usr/local/apache/htdocs/ #Add a new daily tip to the home page 5 5 * * 1-5 /cluster/software/bin/python /cluster/bin/scripts/generateTipOfDay.py -s ~/kent/src/hg/htdocs/allTipsRaw.html #OMIM Upload HGDB_CONF=/cluster/home/otto/.hg.conf.beta 15 05 * * * /hive/data/outside/otto/omim/omimUploadWrapper.sh MAILTO=cells@ucsc.edu