300b9e062efb576d651f590652f3440e24a06caf
jbirgmei
Wed Oct 29 03:08:15 2025 -0700
Small fix for varaico test tracks
diff --git src/hg/makeDb/trackDb/human/trackDb.ra src/hg/makeDb/trackDb/human/trackDb.ra
index 18106afc6c0..fc03f522154 100644
--- src/hg/makeDb/trackDb/human/trackDb.ra
+++ src/hg/makeDb/trackDb/human/trackDb.ra
@@ -253,47 +253,47 @@
bigDataUrl /gbdb/$D/bbi/varaicoSuppl.bb
noScoreFilter on
exonNumbers off
# itemRgb on
dataVersion release 1
parent varsInPubs pack
urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" rgene="https://www.ncbi.nlm.nih.gov/nuccore/$$"
mouseOver $hgncSymbol $variantOrigStrs in: $author ($journal, $year) - $title
Number of publications: $articlesCount
Variant Effect: $variantEffect
html varaico.html
track varaicoTest
shortLabel Varaico Main Test
longLabel Varaico Main Test
visibility dense
type bigBed 9 +
- bigDataUrl /hive/users/jbirgmei/amelie2/data/out/full/$D/normalized_variants.$D.bb
+ bigDataUrl /hive/users/jbirgmei/amelie2/data/out/None/full/$D/normalized_variants.$D.bb
noScoreFilter on
exonNumbers off
# itemRgb on
dataVersion release 1
parent varsInPubs pack
urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" rgene="https://www.ncbi.nlm.nih.gov/nuccore/$$"
mouseOver $hgncSymbol $variantOrigStrs in: $author ($journal, $year) - $title
Number of publications: $articlesCount
Variant Effect: $variantEffect
html varaico.html
release alpha
track varaicoSupplTest
shortLabel Varaico Suppl Test
longLabel Varaico Suppl Test
visibility dense
type bigBed 9 +
- bigDataUrl /hive/users/jbirgmei/amelie2/data/out/full/$D/normalized_variants_supplements.$D.bb
+ bigDataUrl /hive/users/jbirgmei/amelie2/data/out/None/full/$D/normalized_variants_supplements.$D.bb
noScoreFilter on
exonNumbers off
# itemRgb on
dataVersion release 1
parent varsInPubs pack
urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" rgene="https://www.ncbi.nlm.nih.gov/nuccore/$$"
mouseOver $hgncSymbol $variantOrigStrs in: $author ($journal, $year) - $title
Number of publications: $articlesCount
Variant Effect: $variantEffect
html varaico.html
release alpha
track caseControl
compositeTrack on
shortLabel Case Control
longLabel Case Control Consortium
group phenDis