8a3f24f0e70e94dc4812283bbd60c715651d6c46 lrnassar Mon Nov 3 14:50:27 2025 -0800 Staging the ENCODE4 cCREs track. Next step is asking for feedback from the authors, refs #34923 diff --git src/hg/makeDb/trackDb/human/hg38/cCREsSuper.html src/hg/makeDb/trackDb/human/hg38/cCREsSuper.html new file mode 100644 index 00000000000..2812a3bc4fa --- /dev/null +++ src/hg/makeDb/trackDb/human/hg38/cCREsSuper.html @@ -0,0 +1,20 @@ +<H2>Description</H2> +<p> +This track contains cCREs (candidate Cis-Regulatory Elements) data from ENCODE3 and ENCODE4. +Below is a short summary of each track.</p> +<ul> +<li><b>ENCODE4 cCREs</b>: ENCODE4 data containing the cCREs identified and classified from all +ENCODE4 samples. The data were combined, so this track is a representation of all +the underlying data in one track.</li> +<li><b>ENCODE4 Core Collection</b>: ENCODE4 data containing additional subtracks of the +underlying signals used to create +the ENCODE4 cCREs track above. The track also contains cCREs tracks that are sample-specific.</li> +<li><b>ENCODE3 cCREs</b>: This track is similar to the ENCODE4 cCREs, but created from the ENCODE3 +data. ENCODE4 includes the ENCODE3 data, so ENCODE4 should be used whenever possible. This track +exists for archival and reproducibility purposes.</li> +</ul> + +<H2>Display conventions, data access, and credits</H2> +<p> +For information on track configuration, data description, data access, methods, and data provenance, +see the individual track description pages via their links above</p>