6a7655f06c1581853f1a028eb29e17caecfba6a0 max Wed Oct 29 07:26:54 2025 -0700 adding RNA modifications superTrack, refs #36613 diff --git src/hg/makeDb/trackDb/human/hg38/rnaMod.html src/hg/makeDb/trackDb/human/hg38/rnaMod.html new file mode 100644 index 00000000000..f8dccb80784 --- /dev/null +++ src/hg/makeDb/trackDb/human/hg38/rnaMod.html @@ -0,0 +1,37 @@ +

Description

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+Like DNA, RNA also can carry chemical modifications. N 6‐methyladenosine (m6A), +installed onto mRNA by the METTL3/METTL14 methyltransferase complex, is the +most prevalent mRNA modification. m6A methylation regulates gene expression by +influencing numerous aspects of mRNA metabolism, including pre‐mRNA processing, +nuclear export, decay, and translation.

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Display Conventions

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Methylated sites are highlighted. +

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Data Access

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+todo. +

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Methods

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+For the fetal data from Xiao 2019, data was downloaded from NCBI GEO GSE114150 in bed format and merged with a custom Python script. +

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Credits

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+Thanks to Natacha Clairet and Guillaume Riviere for paper suggestions. +

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References

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+Xiao S, Cao S, Huang Q, Xia L, Deng M, Yang M, Jia G, Liu X, Shi J, Wang W et al. + +The RNA N(6)-methyladenosine modification landscape of human fetal tissues. +Nat Cell Biol. 2019 May;21(5):651-661. +PMID: 31036937 +

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