7072384d5e6f4228bec4186d3d677527be0c9bc5
mspeir
  Fri Jun 26 09:37:20 2026 -0700
Adding data access to hs1 pages on the RR, refs #

diff --git src/hg/makeDb/trackDb/human/hs1/html/censat.html src/hg/makeDb/trackDb/human/hs1/html/censat.html
index 53bdc97ab6e..b4d33522f20 100644
--- src/hg/makeDb/trackDb/human/hs1/html/censat.html
+++ src/hg/makeDb/trackDb/human/hs1/html/censat.html
@@ -25,30 +25,54 @@
   <tr><td>
   <tr><td>Active &alpha;Sat HOR (hor ... L)             <td style="color: #FA0000">red</tr>
   <tr><td>Inactive &alpha;Sat HOR (hor)                 <td style="color: #FF9200">orange</tr>
   <tr><td>Divergent &alpha;Sat HOR (dhor)               <td style="color: #990000">dark red</tr>
   <tr><td>Monomeric &alpha;Sat (mon)                    <td style="color: #FFCC99">peach/yellow</tr>
   <tr><td>Classical Human Satellite 1A (hsat1A)   <td style="color: #91FF00">light green</tr>
   <tr><td>Classical Human Satellite 1B (hsat1B)   <td style="color: #00994C">dark green</tr>
   <tr><td>Classical Human Satellite 2 (hsat2)     <td style="color: #0080FA">light blue</tr>
   <tr><td>Classical Human Satellite 3 (hsat3)     <td style="color: #0000FA">blue</tr>
   <tr><td>Beta Satellite (bsat)                   <td style="color: #FA99FF">pink</tr>
   <tr><td>Gamma Satellite (gsat)                  <td style="color: #AC33C7">purple</tr>
   <tr><td>Other centromeric satellites (censat)   <td style="color: #00CCCC">teal</tr>
   <tr><td>Centromeric transition regions (ct)     <td style="color: #E0E0E0">grey</tr>
 </table>
 
+<h2>Data Access</h2>
+<p>
+The raw data can be explored interactively with the
+<a href="../cgi-bin/hgTables" target="_blank">Table Browser</a> or the
+<a href="../cgi-bin/hgIntegrator" target="_blank">Data Integrator</a>. The data can also be
+accessed from scripts through our <a href="https://api.genome.ucsc.edu" target="_blank">REST
+API</a>, where the track name is <tt>censat</tt>.</p>
+<p>
+For automated analysis, the data may be downloaded from our
+<a href="https://hgdownload.soe.ucsc.edu/gbdb/$db/censat/" target="_blank">download server</a> as a
+bigBed file. The file for this track is called <tt>censat.bb</tt>. Individual regions or the whole
+genome annotation can be obtained using our tool <tt>bigBedToBed</tt>, which can be compiled from
+the source code or downloaded as a precompiled binary for your system. Instructions for downloading
+source code and binaries can be found
+<a href="https://hgdownload.soe.ucsc.edu/downloads.html#utilities_downloads" target="_blank">here</a>.
+The tool can also be used to obtain only features within a given range, for example:</p>
+<tt>bigBedToBed https://hgdownload.soe.ucsc.edu/gbdb/$db/censat/censat.bb -chrom=chr6 -start=0 -end=1000000 stdout</tt>
+<p>
+Please refer to our
+<a href="https://groups.google.com/a/soe.ucsc.edu/forum/#!forum/genome" target="_blank">mailing
+list archives</a> for questions, or our
+<a href="../FAQ/FAQdownloads.html#download36" target="_blank">Data Access FAQ</a> for more
+information.</p>
+
 <h2>Credits</h2>
 <p>
 <A HREF="mailto:&#107;&#104;m&#105;&#103;a&#64;&#117;&#99;&#115;&#99;.
 &#101;&#100;u">Karen Miga
 &lt;&#107;&#104;m&#105;&#103;a&#64;&#117;&#99;&#115;&#99;.&#101;&#100;u&gt;</A>,
 Nicolas Altemose, Ivan A. Alexandrov
 </p>
 
 <h2>References</h2>
 <p>
 Altemose N, Logsdon GA, Bzikadze AV, Sidhwani P, Langley SA, Caldas GV, Hoyt SJ, Uralsky L, Ryabov
 FD, Shew CJ <em>et al</em>.
 <a href="https://www.science.org/doi/10.1126/science.abl4178" target="_blank">
 Complete genomic and epigenetic maps of human centromeres</a>.
 <em>Science</em>. 2022 Apr;376(6588):eabl4178.