d947dcc75b04fd0dc921c0eb02ed988d7b4819f0
braney
  Mon Jun 30 16:00:56 2025 -0700
let genark hubs appear in hgConvert if we can figure out their UCSC org

diff --git src/hg/inc/genark.h src/hg/inc/genark.h
index 25876f7c5f7..16587cee49e 100644
--- src/hg/inc/genark.h
+++ src/hg/inc/genark.h
@@ -110,17 +110,25 @@
 /* return the genark table name from the environment, 
  * or hg.conf, or use the default.  Cache the result */
 
 /* temporary function while the genark table is in transistion with
  * new coluns being added, July 2024.  Allows compatibility with existing
  * genark table.
  */
 int genArkColumnCount();
 /* return number of columns in genark table */
 
 boolean isGenArk(char *genome);
 /* given a genome name, see if it is in the genark table to determine
  *  yes/no this is a genark genome assembly
  */
 
+struct dbDb *genarkLiftOverDbs(char *listOfAccs);
+/* return list of dbDb structures for the genark genomes that match listOfAccs */
+
+struct dbDb *genarkLiftOverDb(char *acc);
+/* return dbDb structure for GC* acc */
+
+struct hash *genarkGetOrgHash();
+/* read table that maps gcAccession to UCSC org. */
 #endif /* GENARK_H */