ff4d234bc327996bad7dfe2d7a26a4a579c20444 braney Sat Sep 5 07:29:21 2026 -0700 cartTrackVarCatalog: baseline two filenames the scan reads as cart vars. Both are the false-positive class the harvester's own docstring names beside .bai and .tbi: a filename built with safef, where the literal in the format string looks like a track-scoped suffix. ss.ps hgc/rnaFoldClick.c:426, "%s_ss.ps", the PostScript file RNAplot writes for the RNA fold diagram. tmp lib/trackHub.c:2197, "%s.tmp", the temporary file writeMergedHubFile renames into place so a reader on the target assembly never sees a half-written quickLift hub. Neither is a cart variable, so they go in cartVarsNotCataloged.txt and the nightly reconcile goes quiet again. refs #37838 diff --git src/hg/utils/cartTrackVarCatalog/cartVarsNotCataloged.txt src/hg/utils/cartTrackVarCatalog/cartVarsNotCataloged.txt index 1b7639823d0..a22f3e1a72e 100644 --- src/hg/utils/cartTrackVarCatalog/cartVarsNotCataloged.txt +++ src/hg/utils/cartTrackVarCatalog/cartVarsNotCataloged.txt @@ -70,21 +70,23 @@ minAc # hg/lib/vcfUi.c mouseover # hg/hgc/myVariantsClick.c name # hg/hgc/myVariantsClick.c next # hg/lib/tablesTables.c pdf # hg/hgc/hgdpClick.c pfamDesc # hg/hgc/hgc.c pie.txt # hg/hgc/hgdpClick.c png # hg/hgc/hgdpClick.c prev # hg/lib/tablesTables.c project # hg/hgc/myVariantsClick.c projectSelect # hg/hgc/myVariantsClick.c prot # hg/hgc/hgc.c ref # hg/hgc/myVariantsClick.c sel_id # hg/hgTracks/searchTracks.c som # hg/hgTracks/gvfTrack.c +ss.ps # hg/hgc/rnaFoldClick.c thickEnd # hg/hgc/myVariantsClick.c thickStart # hg/hgc/myVariantsClick.c +tmp # hg/lib/trackHub.c unip # hg/hgTracks/gvfTrack.c unk # hg/hgTracks/gvfTrack.c wig # hg/lib/wigDataStream.c wikiTrack # hg/hgTables/hgTables.c