b7b9978c92a2376d6d9ef4f0a4974cb8167295f8
gperez2
Wed Sep 30 14:17:50 2026 -0700
Updating the TAD tracks from the qa-track SKILL.md pass (hg19, hg38, mm10, mm39): shortLabel fixes for cut-off and duplicate ENCODE and 3DGB subtracks, lowercase biosamples in ENCODE longLabels, " bnd" dropped from Schmitt shortLabels, 3DGB subtracks set to pack with three mm10/mm39 defaults turned on, allButtonPair removed so the Schmitt matrix shows, and McArthur item labels hidden. Merged identical description pages into human/ and mouse/, plus description page cleanups (regenerated References, removed the "How to use these tracks" section, ENCODE pages now say 112 of 117 biosamples use Arrowhead). Also updated the ENCODE metadata columns and organ example in the hg38 makedoc. refs #21599
diff --git src/hg/makeDb/trackDb/human/hg38/tadsEncode.ra src/hg/makeDb/trackDb/human/hg38/tadsEncode.ra
index 1e0a2c46b7f..1ea9788c8e5 100644
--- src/hg/makeDb/trackDb/human/hg38/tadsEncode.ra
+++ src/hg/makeDb/trackDb/human/hg38/tadsEncode.ra
@@ -1,85 +1,85 @@
track tadsEncode
parent tads
priority 2
compositeTrack faceted
shortLabel ENCODE TADs
-longLabel ENCODE contact domains (TADs) across 117 human biosamples (Arrowhead/Hi-C)
+longLabel ENCODE contact domains (TADs) across 117 human biosamples (Hi-C)
type bigBed 4 + 5
group regulation
visibility pack
metaDataUrl /gbdb/hg38/bbi/tad/tadsEncode_metadata.tsv
primaryKey Accession
colorSettingsUrl /gbdb/hg38/bbi/tad/organ_colors.json
subtrackUrls Accession=https://www.encodeproject.org/experiments/$$/
maxCheckboxes 50
html tadsEncode
track tadsEncode_ENCSR662QKG
parent tadsEncode on
shortLabel A549
longLabel ENCODE TADs in A549 (ENCSR662QKG)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/A549.bb
color 130,163,45
visibility dense
mouseOver Biosample: A549
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR165UJN
parent tadsEncode on
- shortLabel Dorsolateral
- longLabel ENCODE TADs in Dorsolateral prefrontal cortex (ENCSR165UJN)
+ shortLabel Dorsolateral PFC
+ longLabel ENCODE TADs in dorsolateral prefrontal cortex (ENCSR165UJN)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/dorsolateralprefrontalcortex.bb
color 155,155,18
visibility dense
mouseOver Biosample: Dorsolateral prefrontal cortex
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR916MFV
parent tadsEncode on
shortLabel GM12878
longLabel ENCODE TADs in GM12878 (ENCSR916MFV)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/GM12878.bb
color 254,75,173
visibility dense
mouseOver Biosample: GM12878
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR477GZK
parent tadsEncode on
shortLabel HCT116
longLabel ENCODE TADs in HCT116 (ENCSR477GZK)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/HCT116.bb
color 86,86,36
visibility dense
mouseOver Biosample: HCT116
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR324EJR
parent tadsEncode on
shortLabel Heart left ventricle
- longLabel ENCODE TADs in Heart left ventricle (ENCSR324EJR)
+ longLabel ENCODE TADs in heart left ventricle (ENCSR324EJR)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/heartleftventricle.bb
color 116,50,165
visibility dense
mouseOver Biosample: Heart left ventricle
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR908NSV
parent tadsEncode on
shortLabel Heart right ventricle
- longLabel ENCODE TADs in Heart right ventricle (ENCSR908NSV)
+ longLabel ENCODE TADs in heart right ventricle (ENCSR908NSV)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/heartrightventricle.bb
color 116,50,165
visibility dense
mouseOver Biosample: Heart right ventricle
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR888DEJ
parent tadsEncode on
shortLabel HepG2
longLabel ENCODE TADs in HepG2 (ENCSR888DEJ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/HepG2.bb
color 137,152,82
visibility dense
mouseOver Biosample: HepG2
Arrowhead corner score: $cornerScore
@@ -105,241 +105,241 @@
mouseOver Biosample: IMR-90
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR479XDG
parent tadsEncode on
shortLabel K562
longLabel ENCODE TADs in K562 (ENCSR479XDG)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/K562.bb
color 254,75,173
visibility dense
mouseOver Biosample: K562
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR305RTT
parent tadsEncode on
shortLabel Motor neuron
- longLabel ENCODE TADs in Motor neuron (ENCSR305RTT)
+ longLabel ENCODE TADs in motor neuron (ENCSR305RTT)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/motorneuron.bb
color 155,155,18
visibility dense
mouseOver Biosample: Motor neuron
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR872ZCP
parent tadsEncode on
shortLabel Ovary
- longLabel ENCODE TADs in Ovary (ENCSR872ZCP)
+ longLabel ENCODE TADs in ovary (ENCSR872ZCP)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/ovary.bb
color 161,126,151
visibility dense
mouseOver Biosample: Ovary
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR408HOG
parent tadsEncode on
shortLabel Pancreas
- longLabel ENCODE TADs in Pancreas (ENCSR408HOG)
+ longLabel ENCODE TADs in pancreas (ENCSR408HOG)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/pancreas.bb
color 175,100,41
visibility dense
mouseOver Biosample: Pancreas
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR258OVY
parent tadsEncode on
shortLabel Transverse colon
- longLabel ENCODE TADs in Transverse colon (ENCSR258OVY)
+ longLabel ENCODE TADs in transverse colon (ENCSR258OVY)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/transversecolon.bb
color 86,86,36
visibility dense
mouseOver Biosample: Transverse colon
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR455KLX
parent tadsEncode off
shortLabel A673
longLabel ENCODE TADs in A673 (ENCSR455KLX)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/A673.bb
color 137,135,170
visibility dense
mouseOver Biosample: A673
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR343VKT
parent tadsEncode off
shortLabel ACHN
longLabel ENCODE TADs in ACHN (ENCSR343VKT)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/ACHN.bb
color 92,161,153
visibility dense
mouseOver Biosample: ACHN
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR693PXD
parent tadsEncode off
shortLabel Activated B cell
- longLabel ENCODE TADs in Activated B cell (ENCSR693PXD)
+ longLabel ENCODE TADs in activated B cell (ENCSR693PXD)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/activatedBcell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Activated B cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR291EBI
parent tadsEncode off
- shortLabel Activated CD4+ memory
- longLabel ENCODE TADs in Activated CD4-positive, alpha-beta memory T cell (ENCSR291EBI)
+ shortLabel Act. CD4+ mem. T cell
+ longLabel ENCODE TADs in activated CD4-positive, alpha-beta memory T cell (ENCSR291EBI)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/activatedCD4positivealphabetamemoryTcell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Activated CD4-positive, alpha-beta memory T cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR836MWK
parent tadsEncode off
shortLabel Activated CD4+ T cell
- longLabel ENCODE TADs in Activated CD4-positive, alpha-beta T cell (ENCSR836MWK)
+ longLabel ENCODE TADs in activated CD4-positive, alpha-beta T cell (ENCSR836MWK)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/activatedCD4positivealphabetaTcell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Activated CD4-positive, alpha-beta T cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR351NAI
parent tadsEncode off
shortLabel Activated CD8+ T cell
- longLabel ENCODE TADs in Activated CD8-positive, alpha-beta T cell (ENCSR351NAI)
+ longLabel ENCODE TADs in activated CD8-positive, alpha-beta T cell (ENCSR351NAI)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/activatedCD8positivealphabetaTcell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Activated CD8-positive, alpha-beta T cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR195ETV
parent tadsEncode off
- shortLabel Activated naive CD4+ T
- longLabel ENCODE TADs in Activated naive CD4-positive, alpha-beta T cell (ENCSR195ETV)
+ shortLabel Act. naive CD4+ T cell
+ longLabel ENCODE TADs in activated naive CD4-positive, alpha-beta T cell (ENCSR195ETV)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/activatednaiveCD4positivealphabetaTcell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Activated naive CD4-positive, alpha-beta T cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR902BCW
parent tadsEncode off
shortLabel Activated T-helper 1
- longLabel ENCODE TADs in Activated T-helper 1 cell (ENCSR902BCW)
+ longLabel ENCODE TADs in activated T-helper 1 cell (ENCSR902BCW)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/activatedThelper1cell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Activated T-helper 1 cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR474VTW
parent tadsEncode off
shortLabel Activated T-helper 2
- longLabel ENCODE TADs in Activated T-helper 2 cell (ENCSR474VTW)
+ longLabel ENCODE TADs in activated T-helper 2 cell (ENCSR474VTW)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/activatedThelper2cell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Activated T-helper 2 cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR832NED
parent tadsEncode off
shortLabel Adrenal gland
- longLabel ENCODE TADs in Adrenal gland (ENCSR832NED)
+ longLabel ENCODE TADs in adrenal gland (ENCSR832NED)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/adrenalgland.bb
color 90,179,68
visibility dense
mouseOver Biosample: Adrenal gland
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR554SLA
parent tadsEncode off
shortLabel Aorta
- longLabel ENCODE TADs in Aorta (ENCSR554SLA)
+ longLabel ENCODE TADs in aorta (ENCSR554SLA)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/aorta.bb
color 255,37,41
visibility dense
mouseOver Biosample: Aorta
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR464RYO
parent tadsEncode off
shortLabel Ascending aorta
- longLabel ENCODE TADs in Ascending aorta (ENCSR464RYO)
+ longLabel ENCODE TADs in ascending aorta (ENCSR464RYO)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/ascendingaorta.bb
color 255,37,41
visibility dense
mouseOver Biosample: Ascending aorta
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR011GNI
parent tadsEncode off
- shortLabel The cerebellum
- longLabel ENCODE TADs in Astrocyte of the cerebellum (ENCSR011GNI)
+ shortLabel Cerebellum astrocyte
+ longLabel ENCODE TADs in astrocyte of the cerebellum (ENCSR011GNI)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/astrocyteofthecerebellum.bb
color 155,155,18
visibility dense
mouseOver Biosample: Astrocyte of the cerebellum
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR974LXZ
parent tadsEncode off
- shortLabel The spinal cord
- longLabel ENCODE TADs in Astrocyte of the spinal cord (ENCSR974LXZ)
+ shortLabel Spinal cord astrocyte
+ longLabel ENCODE TADs in astrocyte of the spinal cord (ENCSR974LXZ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/astrocyteofthespinalcord.bb
color 130,141,158
visibility dense
mouseOver Biosample: Astrocyte of the spinal cord
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR847RHU
parent tadsEncode off
shortLabel B cell
longLabel ENCODE TADs in B cell (ENCSR847RHU)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/Bcell.bb
color 254,75,173
visibility dense
mouseOver Biosample: B cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR121ALS
parent tadsEncode off
shortLabel Pancreas body
- longLabel ENCODE TADs in Body of pancreas (ENCSR121ALS)
+ longLabel ENCODE TADs in body of pancreas (ENCSR121ALS)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/bodyofpancreas.bb
color 175,100,41
visibility dense
mouseOver Biosample: Body of pancreas
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR507AHE
parent tadsEncode off
- shortLabel Brain microvascular
- longLabel ENCODE TADs in Brain microvascular endothelial cell (ENCSR507AHE)
+ shortLabel Brain microvasc. EC
+ longLabel ENCODE TADs in brain microvascular endothelial cell (ENCSR507AHE)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/brainmicrovascularendothelialcell.bb
color 155,155,18
visibility dense
mouseOver Biosample: Brain microvascular endothelial cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR326YHP
parent tadsEncode off
shortLabel Breast epithelium
- longLabel ENCODE TADs in Breast epithelium (ENCSR326YHP)
+ longLabel ENCODE TADs in breast epithelium (ENCSR326YHP)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/breastepithelium.bb
color 65,171,173
visibility dense
mouseOver Biosample: Breast epithelium
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR820DYU
parent tadsEncode off
shortLabel Caco-2
longLabel ENCODE TADs in Caco-2 (ENCSR820DYU)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/Caco2.bb
color 86,86,36
visibility dense
mouseOver Biosample: Caco-2
Arrowhead corner score: $cornerScore
@@ -355,31 +355,31 @@
mouseOver Biosample: Caki2
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR118AQZ
parent tadsEncode off
shortLabel Calu3
longLabel ENCODE TADs in Calu3 (ENCSR118AQZ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/Calu3.bb
color 130,163,45
visibility dense
mouseOver Biosample: Calu3
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR556QHB
parent tadsEncode off
shortLabel Cardiac septum
- longLabel ENCODE TADs in Cardiac septum (ENCSR556QHB)
+ longLabel ENCODE TADs in cardiac septum (ENCSR556QHB)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/cardiacseptum.bb
color 116,50,165
visibility dense
mouseOver Biosample: Cardiac septum
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR236EYO
parent tadsEncode off
shortLabel CD14+ monocyte
longLabel ENCODE TADs in CD14-positive monocyte (ENCSR236EYO)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/CD14positivemonocyte.bb
color 254,75,173
visibility dense
mouseOver Biosample: CD14-positive monocyte
Arrowhead corner score: $cornerScore
@@ -405,151 +405,151 @@
mouseOver Biosample: CD4-positive, alpha-beta T cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR558BNW
parent tadsEncode off
shortLabel CD8+ T cell
longLabel ENCODE TADs in CD8-positive, alpha-beta T cell (ENCSR558BNW)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/CD8positivealphabetaTcell.bb
color 254,75,173
visibility dense
mouseOver Biosample: CD8-positive, alpha-beta T cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR317GNS
parent tadsEncode off
shortLabel Chondrocyte
- longLabel ENCODE TADs in Chondrocyte (ENCSR317GNS)
+ longLabel ENCODE TADs in chondrocyte (ENCSR317GNS)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/chondrocyte.bb
color 138,135,169
visibility dense
mouseOver Biosample: Chondrocyte
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR439ILZ
parent tadsEncode off
shortLabel Colonic mucosa
- longLabel ENCODE TADs in Colonic mucosa (ENCSR439ILZ)
+ longLabel ENCODE TADs in colonic mucosa (ENCSR439ILZ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/colonicmucosa.bb
color 86,86,36
visibility dense
mouseOver Biosample: Colonic mucosa
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR456QYU
parent tadsEncode off
shortLabel Dendritic cell
- longLabel ENCODE TADs in Dendritic cell (ENCSR456QYU)
+ longLabel ENCODE TADs in dendritic cell (ENCSR456QYU)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/dendriticcell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Dendritic cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR213DHH
parent tadsEncode off
shortLabel DLD1
longLabel ENCODE TADs in DLD1 (ENCSR213DHH)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/DLD1.bb
color 86,86,36
visibility dense
mouseOver Biosample: DLD1
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR393XVI
parent tadsEncode off
shortLabel Ectodermal cell
- longLabel ENCODE TADs in Ectodermal cell (ENCSR393XVI)
+ longLabel ENCODE TADs in ectodermal cell (ENCSR393XVI)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/ectodermalcell.bb
color 118,158,101
visibility dense
mouseOver Biosample: Ectodermal cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR233RDF
parent tadsEncode off
shortLabel Endodermal cell
- longLabel ENCODE TADs in Endodermal cell (ENCSR233RDF)
+ longLabel ENCODE TADs in endodermal cell (ENCSR233RDF)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/endodermalcell.bb
color 118,158,101
visibility dense
mouseOver Biosample: Endodermal cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR551IPY
parent tadsEncode off
- shortLabel Endometrial
- longLabel ENCODE TADs in Endometrial microvascular endothelial cells (ENCSR551IPY)
+ shortLabel Endometrial EC
+ longLabel ENCODE TADs in endometrial microvascular endothelial cells (ENCSR551IPY)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/endometrialmicrovascularendothelialcells.bb
color 186,111,165
visibility dense
mouseOver Biosample: Endometrial microvascular endothelial cells
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR982KWR
parent tadsEncode off
- shortLabel Hepatic sinusoid
- longLabel ENCODE TADs in Endothelial cell of hepatic sinusoid (ENCSR982KWR)
+ shortLabel Hepatic sinusoid EC
+ longLabel ENCODE TADs in endothelial cell of hepatic sinusoid (ENCSR982KWR)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/endothelialcellofhepaticsinusoid.bb
color 137,152,82
visibility dense
mouseOver Biosample: Endothelial cell of hepatic sinusoid
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR788FBI
parent tadsEncode off
- shortLabel Umbilical vein
- longLabel ENCODE TADs in Endothelial cell of umbilical vein (ENCSR788FBI)
+ shortLabel Umbilical vein EC
+ longLabel ENCODE TADs in endothelial cell of umbilical vein (ENCSR788FBI)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/endothelialcellofumbilicalvein.bb
color 255,37,41
visibility dense
mouseOver Biosample: Endothelial cell of umbilical vein
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR274FJN
parent tadsEncode off
shortLabel Esophagus muscularis
- longLabel ENCODE TADs in Esophagus muscularis mucosa (ENCSR274FJN)
+ longLabel ENCODE TADs in esophagus muscularis mucosa (ENCSR274FJN)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/esophagusmuscularismucosa.bb
color 159,131,100
visibility dense
mouseOver Biosample: Esophagus muscularis mucosa
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR015CVF
parent tadsEncode off
shortLabel Esophagus squamous
- longLabel ENCODE TADs in Esophagus squamous epithelium (ENCSR015CVF)
+ longLabel ENCODE TADs in esophagus squamous epithelium (ENCSR015CVF)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/esophagussquamousepithelium.bb
color 159,131,100
visibility dense
mouseOver Biosample: Esophagus squamous epithelium
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR079VIJ
parent tadsEncode off
shortLabel G401
longLabel ENCODE TADs in G401 (ENCSR079VIJ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/G401.bb
color 92,161,153
visibility dense
mouseOver Biosample: G401
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR136MVS
parent tadsEncode off
shortLabel Gastrocnemius medialis
- longLabel ENCODE TADs in Gastrocnemius medialis (ENCSR136MVS)
+ longLabel ENCODE TADs in gastrocnemius medialis (ENCSR136MVS)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/gastrocnemiusmedialis.bb
color 137,135,170
visibility dense
mouseOver Biosample: Gastrocnemius medialis
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR196MPD
parent tadsEncode off
shortLabel GM11168
longLabel ENCODE TADs in GM11168 (ENCSR196MPD)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/GM11168.bb
color 254,75,173
visibility dense
mouseOver Biosample: GM11168
Arrowhead corner score: $cornerScore
@@ -605,31 +605,31 @@
mouseOver Biosample: GM23248
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR390HMC
parent tadsEncode off
shortLabel HAP-1
longLabel ENCODE TADs in HAP-1 (ENCSR390HMC)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/HAP1.bb
color 2,199,185
visibility dense
mouseOver Biosample: HAP-1
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR874HTT
parent tadsEncode off
shortLabel Caudate nucleus head
- longLabel ENCODE TADs in Head of caudate nucleus (ENCSR874HTT)
+ longLabel ENCODE TADs in head of caudate nucleus (ENCSR874HTT)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/headofcaudatenucleus.bb
color 155,155,18
visibility dense
mouseOver Biosample: Head of caudate nucleus
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR846DUS
parent tadsEncode off
shortLabel hTERT RPE-1
longLabel ENCODE TADs in hTERT RPE-1 (ENCSR846DUS)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/hTERTRPE1.bb
color 163,127,144
visibility dense
mouseOver Biosample: hTERT RPE-1
Arrowhead corner score: $cornerScore
@@ -655,211 +655,211 @@
mouseOver Biosample: Jurkat
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR987EPR
parent tadsEncode off
shortLabel KBM-7
longLabel ENCODE TADs in KBM-7 (ENCSR987EPR)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/KBM7.bb
color 2,199,185
visibility dense
mouseOver Biosample: KBM-7
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR869CSI
parent tadsEncode off
shortLabel Keratinocyte
- longLabel ENCODE TADs in Keratinocyte (ENCSR869CSI)
+ longLabel ENCODE TADs in keratinocyte (ENCSR869CSI)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/keratinocyte.bb
color 127,133,209
visibility dense
mouseOver Biosample: Keratinocyte
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR044YKV
parent tadsEncode off
shortLabel Kidney
- longLabel ENCODE TADs in Kidney (ENCSR044YKV)
+ longLabel ENCODE TADs in kidney (ENCSR044YKV)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/kidney.bb
color 92,161,153
visibility dense
mouseOver Biosample: Kidney
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR975NRV
parent tadsEncode off
shortLabel Left cardiac atrium
- longLabel ENCODE TADs in Left cardiac atrium (ENCSR975NRV)
+ longLabel ENCODE TADs in left cardiac atrium (ENCSR975NRV)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/leftcardiacatrium.bb
color 116,50,165
visibility dense
mouseOver Biosample: Left cardiac atrium
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR298UUL
parent tadsEncode off
shortLabel Left colon
- longLabel ENCODE TADs in Left colon (ENCSR298UUL)
+ longLabel ENCODE TADs in left colon (ENCSR298UUL)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/leftcolon.bb
color 86,86,36
visibility dense
mouseOver Biosample: Left colon
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR892BZA
parent tadsEncode off
shortLabel Left lung
- longLabel ENCODE TADs in Left lung (ENCSR892BZA)
+ longLabel ENCODE TADs in left lung (ENCSR892BZA)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/leftlung.bb
color 130,163,45
visibility dense
mouseOver Biosample: Left lung
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR352EGR
parent tadsEncode off
- shortLabel Left ventricle
- longLabel ENCODE TADs in Left ventricle myocardium inferior (ENCSR352EGR)
+ shortLabel Left ventricle inf.
+ longLabel ENCODE TADs in left ventricle myocardium inferior (ENCSR352EGR)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/leftventriclemyocardiuminferior.bb
color 116,50,165
visibility dense
mouseOver Biosample: Left ventricle myocardium inferior
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR333BMU
parent tadsEncode off
- shortLabel Left ventricle
- longLabel ENCODE TADs in Left ventricle myocardium superior (ENCSR333BMU)
+ shortLabel Left ventricle sup.
+ longLabel ENCODE TADs in left ventricle myocardium superior (ENCSR333BMU)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/leftventriclemyocardiumsuperior.bb
color 116,50,165
visibility dense
mouseOver Biosample: Left ventricle myocardium superior
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR346DCU
parent tadsEncode off
shortLabel LNCaP clone FGC
longLabel ENCODE TADs in LNCaP clone FGC (ENCSR346DCU)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/LNCaPcloneFGC.bb
color 140,140,140
visibility dense
mouseOver Biosample: LNCaP clone FGC
TAD lifted from hg19 (no Arrowhead score)
track tadsEncode_ENCSR720WEB
parent tadsEncode off
shortLabel Lower leg skin
- longLabel ENCODE TADs in Lower leg skin (ENCSR720WEB)
+ longLabel ENCODE TADs in lower leg skin (ENCSR720WEB)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/lowerlegskin.bb
color 127,133,209
visibility dense
mouseOver Biosample: Lower leg skin
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR446NJD
parent tadsEncode off
shortLabel Left lung lower lobe
- longLabel ENCODE TADs in Lower lobe of left lung (ENCSR446NJD)
+ longLabel ENCODE TADs in lower lobe of left lung (ENCSR446NJD)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/lowerlobeofleftlung.bb
color 130,163,45
visibility dense
mouseOver Biosample: Lower lobe of left lung
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR749PID
parent tadsEncode off
shortLabel Right lung lower lobe
- longLabel ENCODE TADs in Lower lobe of right lung (ENCSR749PID)
+ longLabel ENCODE TADs in lower lobe of right lung (ENCSR749PID)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/lowerlobeofrightlung.bb
color 130,163,45
visibility dense
mouseOver Biosample: Lower lobe of right lung
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR707XVJ
parent tadsEncode off
- shortLabel Mammary epithelial
- longLabel ENCODE TADs in Mammary epithelial cell (ENCSR707XVJ)
+ shortLabel Mammary epith. cell
+ longLabel ENCODE TADs in mammary epithelial cell (ENCSR707XVJ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/mammaryepithelialcell.bb
color 65,171,173
visibility dense
mouseOver Biosample: Mammary epithelial cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR370TFL
parent tadsEncode off
shortLabel MCF 10A
longLabel ENCODE TADs in MCF 10A (ENCSR370TFL)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/MCF10A.bb
color 65,171,173
visibility dense
mouseOver Biosample: MCF 10A
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR660LPJ
parent tadsEncode off
shortLabel MCF-7
longLabel ENCODE TADs in MCF-7 (ENCSR660LPJ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/MCF7.bb
color 65,171,173
visibility dense
mouseOver Biosample: MCF-7
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR754GTX
parent tadsEncode off
shortLabel Mesodermal cell
- longLabel ENCODE TADs in Mesodermal cell (ENCSR754GTX)
+ longLabel ENCODE TADs in mesodermal cell (ENCSR754GTX)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/mesodermalcell.bb
color 118,158,101
visibility dense
mouseOver Biosample: Mesodermal cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR944UTX
parent tadsEncode off
- shortLabel Epicardium mesothelial
- longLabel ENCODE TADs in Mesothelial cell of epicardium (ENCSR944UTX)
+ shortLabel Epicardial meso. cell
+ longLabel ENCODE TADs in mesothelial cell of epicardium (ENCSR944UTX)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/mesothelialcellofepicardium.bb
color 116,50,165
visibility dense
mouseOver Biosample: Mesothelial cell of epicardium
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR206OUF
parent tadsEncode off
shortLabel Descending colon
- longLabel ENCODE TADs in Mucosa of descending colon (ENCSR206OUF)
+ longLabel ENCODE TADs in mucosa of descending colon (ENCSR206OUF)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/mucosaofdescendingcolon.bb
color 86,86,36
visibility dense
mouseOver Biosample: Mucosa of descending colon
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR215PTV
parent tadsEncode off
shortLabel Naive CD4+ T cell
- longLabel ENCODE TADs in Naive thymus-derived CD4-positive, alpha-beta T cell (ENCSR215PTV)
+ longLabel ENCODE TADs in naive thymus-derived CD4-positive, alpha-beta T cell (ENCSR215PTV)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/naivethymusderivedCD4positivealphabetaTcell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Naive thymus-derived CD4-positive, alpha-beta T cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR971CJS
parent tadsEncode off
shortLabel Natural killer cell
- longLabel ENCODE TADs in Natural killer cell (ENCSR971CJS)
+ longLabel ENCODE TADs in natural killer cell (ENCSR971CJS)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/naturalkillercell.bb
color 254,75,173
visibility dense
mouseOver Biosample: Natural killer cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR489OCU
parent tadsEncode off
shortLabel NCI-H460
longLabel ENCODE TADs in NCI-H460 (ENCSR489OCU)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/NCIH460.bb
color 130,163,45
visibility dense
mouseOver Biosample: NCI-H460
TAD lifted from hg19 (no Arrowhead score)
@@ -895,151 +895,151 @@
mouseOver Biosample: PC-3
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR859DRK
parent tadsEncode off
shortLabel PC-9
longLabel ENCODE TADs in PC-9 (ENCSR859DRK)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/PC9.bb
color 130,163,45
visibility dense
mouseOver Biosample: PC-9
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR395DZW
parent tadsEncode off
shortLabel Placenta
- longLabel ENCODE TADs in Placenta (ENCSR395DZW)
+ longLabel ENCODE TADs in placenta (ENCSR395DZW)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/placenta.bb
color 104,171,71
visibility dense
mouseOver Biosample: Placenta
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR169JKC
parent tadsEncode off
shortLabel Posterior cingulate
- longLabel ENCODE TADs in Posterior cingulate gyrus (ENCSR169JKC)
+ longLabel ENCODE TADs in posterior cingulate gyrus (ENCSR169JKC)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/posteriorcingulategyrus.bb
color 155,155,18
visibility dense
mouseOver Biosample: Posterior cingulate gyrus
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR941AMF
parent tadsEncode off
shortLabel Posterior vena cava
- longLabel ENCODE TADs in Posterior vena cava (ENCSR941AMF)
+ longLabel ENCODE TADs in posterior vena cava (ENCSR941AMF)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/posteriorvenacava.bb
color 255,37,41
visibility dense
mouseOver Biosample: Posterior vena cava
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR557QRO
parent tadsEncode off
shortLabel Prostate gland
- longLabel ENCODE TADs in Prostate gland (ENCSR557QRO)
+ longLabel ENCODE TADs in prostate gland (ENCSR557QRO)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/prostategland.bb
color 140,140,140
visibility dense
mouseOver Biosample: Prostate gland
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR173QPK
parent tadsEncode off
shortLabel Psoas muscle
- longLabel ENCODE TADs in Psoas muscle (ENCSR173QPK)
+ longLabel ENCODE TADs in psoas muscle (ENCSR173QPK)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/psoasmuscle.bb
color 137,135,170
visibility dense
mouseOver Biosample: Psoas muscle
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR022TPX
parent tadsEncode off
shortLabel Ramos
longLabel ENCODE TADs in Ramos (ENCSR022TPX)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/Ramos.bb
color 254,75,173
visibility dense
mouseOver Biosample: Ramos
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR173VDQ
parent tadsEncode off
shortLabel Right cardiac atrium
- longLabel ENCODE TADs in Right cardiac atrium (ENCSR173VDQ)
+ longLabel ENCODE TADs in right cardiac atrium (ENCSR173VDQ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/rightcardiacatrium.bb
color 116,50,165
visibility dense
mouseOver Biosample: Right cardiac atrium
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR753CKM
parent tadsEncode off
shortLabel Liver right lobe
- longLabel ENCODE TADs in Right lobe of liver (ENCSR753CKM)
+ longLabel ENCODE TADs in right lobe of liver (ENCSR753CKM)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/rightlobeofliver.bb
color 137,152,82
visibility dense
mouseOver Biosample: Right lobe of liver
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR921BHU
parent tadsEncode off
- shortLabel Right ventricle
- longLabel ENCODE TADs in Right ventricle myocardium inferior (ENCSR921BHU)
+ shortLabel Right ventricle inf.
+ longLabel ENCODE TADs in right ventricle myocardium inferior (ENCSR921BHU)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/Rightventriclemyocardiuminferior.bb
color 116,50,165
visibility dense
mouseOver Biosample: Right ventricle myocardium inferior
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR476RFQ
parent tadsEncode off
- shortLabel Right ventricle
- longLabel ENCODE TADs in Right ventricle myocardium superior (ENCSR476RFQ)
+ shortLabel Right ventricle sup.
+ longLabel ENCODE TADs in right ventricle myocardium superior (ENCSR476RFQ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/Rightventriclemyocardiumsuperior.bb
color 116,50,165
visibility dense
mouseOver Biosample: Right ventricle myocardium superior
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR862OGI
parent tadsEncode off
shortLabel RPMI7951
longLabel ENCODE TADs in RPMI7951 (ENCSR862OGI)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/RPMI7951.bb
color 127,133,209
visibility dense
mouseOver Biosample: RPMI7951
TAD lifted from hg19 (no Arrowhead score)
track tadsEncode_ENCSR119TFS
parent tadsEncode off
shortLabel Sciatic nerve
- longLabel ENCODE TADs in Sciatic nerve (ENCSR119TFS)
+ longLabel ENCODE TADs in sciatic nerve (ENCSR119TFS)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/sciaticnerve.bb
color 160,156,0
visibility dense
mouseOver Biosample: Sciatic nerve
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR123ZFD
parent tadsEncode off
shortLabel Sigmoid colon
- longLabel ENCODE TADs in Sigmoid colon (ENCSR123ZFD)
+ longLabel ENCODE TADs in sigmoid colon (ENCSR123ZFD)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/sigmoidcolon.bb
color 86,86,36
visibility dense
mouseOver Biosample: Sigmoid colon
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR998ZSP
parent tadsEncode off
shortLabel SJCRH30
longLabel ENCODE TADs in SJCRH30 (ENCSR998ZSP)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/SJCRH30.bb
color 137,135,170
visibility dense
mouseOver Biosample: SJCRH30
TAD lifted from hg19 (no Arrowhead score)
@@ -1065,41 +1065,41 @@
mouseOver Biosample: SK-N-DZ
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR834DXR
parent tadsEncode off
shortLabel SK-N-MC
longLabel ENCODE TADs in SK-N-MC (ENCSR834DXR)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/SKNMC.bb
color 155,155,18
visibility dense
mouseOver Biosample: SK-N-MC
TAD lifted from hg19 (no Arrowhead score)
track tadsEncode_ENCSR692QWS
parent tadsEncode off
shortLabel Spleen
- longLabel ENCODE TADs in Spleen (ENCSR692QWS)
+ longLabel ENCODE TADs in spleen (ENCSR692QWS)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/spleen.bb
color 136,157,97
visibility dense
mouseOver Biosample: Spleen
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR569OBN
parent tadsEncode off
shortLabel Stomach
- longLabel ENCODE TADs in Stomach (ENCSR569OBN)
+ longLabel ENCODE TADs in stomach (ENCSR569OBN)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/stomach.bb
color 145,144,99
visibility dense
mouseOver Biosample: Stomach
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR949ZZD
parent tadsEncode off
shortLabel T-helper 1 cell
longLabel ENCODE TADs in T-helper 1 cell (ENCSR949ZZD)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/Thelper1cell.bb
color 254,75,173
visibility dense
mouseOver Biosample: T-helper 1 cell
Arrowhead corner score: $cornerScore
@@ -1115,72 +1115,72 @@
mouseOver Biosample: T-helper 2 cell
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR549MGQ
parent tadsEncode off
shortLabel T47D
longLabel ENCODE TADs in T47D (ENCSR549MGQ)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/T47D.bb
color 65,171,173
visibility dense
mouseOver Biosample: T47D
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR870SXX
parent tadsEncode off
shortLabel Testis
- longLabel ENCODE TADs in Testis (ENCSR870SXX)
+ longLabel ENCODE TADs in testis (ENCSR870SXX)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/testis.bb
color 139,140,140
visibility dense
mouseOver Biosample: Testis
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR043XTM
parent tadsEncode off
shortLabel Thyroid gland
- longLabel ENCODE TADs in Thyroid gland (ENCSR043XTM)
+ longLabel ENCODE TADs in thyroid gland (ENCSR043XTM)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/thyroidgland.bb
color 27,119,58
visibility dense
mouseOver Biosample: Thyroid gland
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR601RFS
parent tadsEncode off
shortLabel Tibial artery
- longLabel ENCODE TADs in Tibial artery (ENCSR601RFS)
+ longLabel ENCODE TADs in tibial artery (ENCSR601RFS)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/tibialartery.bb
color 255,37,41
visibility dense
mouseOver Biosample: Tibial artery
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR673UZF
parent tadsEncode off
shortLabel Right lung upper lobe
- longLabel ENCODE TADs in Upper lobe of right lung (ENCSR673UZF)
+ longLabel ENCODE TADs in upper lobe of right lung (ENCSR673UZF)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/upperlobeofrightlung.bb
color 130,163,45
visibility dense
mouseOver Biosample: Upper lobe of right lung
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR008CUR
parent tadsEncode off
shortLabel Uterus
- longLabel ENCODE TADs in Uterus (ENCSR008CUR)
+ longLabel ENCODE TADs in uterus (ENCSR008CUR)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/uterus.bb
color 186,111,165
visibility dense
mouseOver Biosample: Uterus
Arrowhead corner score: $cornerScore
track tadsEncode_ENCSR886JAM
parent tadsEncode off
shortLabel Vagina
- longLabel ENCODE TADs in Vagina (ENCSR886JAM)
+ longLabel ENCODE TADs in vagina (ENCSR886JAM)
type bigBed 4 + 5
bigDataUrl /gbdb/hg38/bbi/tad/tadsEncode/vagina.bb
color 255,101,174
visibility dense
mouseOver Biosample: Vagina
Arrowhead corner score: $cornerScore