c7a78bd7342f93f63acaf6759ca7077b9caaa64c
gperez2
  Wed Jul 22 22:05:43 2026 -0700
Announcing the ENCODE4 cCREs and ENCODE4 Regulation tracks. Adding pennantIcons on mm10 cCREs/cCREregistry/coreCcres and hg38/mm10 ENCODE4 Regulation supertracks, making ENCODE4 Regulation show by default and adding a deprecation pennantIcon on ENCODE3 Regulation. Renaming ENCODE Regulation to ENCODE3 Regulation on hg38 and removing the separate wgEncodeReg.alpha.ra file. refs #37845 refs #34923 refs #37131

diff --git src/hg/makeDb/trackDb/human/hg38/trackDb.ra src/hg/makeDb/trackDb/human/hg38/trackDb.ra
index 8d09075b268..05cf6b61a1a 100644
--- src/hg/makeDb/trackDb/human/hg38/trackDb.ra
+++ src/hg/makeDb/trackDb/human/hg38/trackDb.ra
@@ -672,32 +672,31 @@
 searchType bigBed
 searchDescription DGV Merged Variants
 
 searchTable dgvSupporting
 searchMethod exact
 searchType bigBed
 searchDescription DGV Supporting Variants
 
 track gtexTranscExpr override
 bigDataUrl /gbdb/hg38/gtex/gtexTranscExpr.bb
 
 # ENCODE tracks
 
 include trackDb.gencode.ra
 
-include wgEncodeReg.ra beta,public
-include wgEncodeReg.alpha.ra alpha
+include wgEncodeReg.ra
 include wgEncodeReg4.ra
 
 include encode3.ra
 include encode.cCREs.override.ra
 
 include hic.ra
 
 include gnomad.ra
 include gnomadMpc.ra alpha
 
 
 include platinumGenomes.ra
 
 track epdNew
 compositeTrack on