df99c448f8e0386bb718da0044b22752fc145713 gperez2 Thu Jun 4 00:15:12 2026 -0700 Updating ENCODE4 Regulation labels and description pages for hg38 and mm10. refs #34923 - Capitalized 363 hg38 Layered organ shortLabels and shortened the over-length TF rPeaks and Indiv. composite longLabels; updated the mm10 TF ChIP container longLabel. - TF rPeaks: added the missing SHOX2 to filterValues.factor (now 912), and updated "911 factors"/"2,502 experiments" to "912"/"2,509". - Supertrack pages: changed Layered bullets from "highlights" to "displays", reworded the histone and CTCF bullets, updated the default-organ note, and updated stale hg38 organ counts to 38/41/26/38/36. - Updated the TF ChIP facet name "Tf" -> "TF" on both description pages. - Makedoc: updated hg38 "911-factor" -> "912-factor" and mm10 RNA-seq Unstranded "26" -> "8". diff --git src/hg/makeDb/trackDb/human/hg38/wgEncodeReg4Epigenetics.ra src/hg/makeDb/trackDb/human/hg38/wgEncodeReg4Epigenetics.ra index b6622a7e41a..85772516d32 100644 --- src/hg/makeDb/trackDb/human/hg38/wgEncodeReg4Epigenetics.ra +++ src/hg/makeDb/trackDb/human/hg38/wgEncodeReg4Epigenetics.ra @@ -1,21 +1,21 @@ track wgEncodeReg4Epigenetics compositeTrack faceted type bed 3 superTrack wgEncodeReg4 hide shortLabel DNase/ATAC/Histone/CTCF (Indiv.) -longLabel Peaks and signal from individual DNase-seq, ATAC-seq, histone ChIP-seq, or CTCF ChIP-seq experiments from ENCODE 4 +longLabel Peaks and signal from individual DNase, ATAC, histone, and CTCF experiments from ENCODE 4 visibility hide html wgEncodeReg4Epigenetics.html colorSettingsUrl /gbdb/hg38/encode4/regulation/epi_colors.json metaDataUrl /gbdb/hg38/encode4/regulation/wgEncodeReg4Epigenetics_metadata.tsv primaryKey accession subtrackUrls accession=https://www.encodeproject.org/files/$$/ Experiment=https://www.encodeproject.org/experiments/$$/ defaultSortField _Experiment maxCheckboxes 50 noInherit on priority 2.0 track wgEncodeReg4Epigenetics_ENCFF094EYJ type bigWig parent wgEncodeReg4Epigenetics off shortLabel ENCSR540BML Signal