e5116de1d75b89b28693d3df2a3531f7b6c4a6eb gperez2 Fri Jun 5 11:49:58 2026 -0700 Restored the standalone ENCODE Expression superTrack on mm10 per team discussion on #37001. Added ENCODE3 Regulation and ENCODE4 Regulation as related tracks on mm10. Added a Released TBD pennantIcon on the mm10 and mm39 superTracks. refs #37001 diff --git src/hg/makeDb/trackDb/mouse/mm10/encode3.atac.ra src/hg/makeDb/trackDb/mouse/mm10/encode3.atac.ra index 1e7cd238de0..6561d034af1 100644 --- src/hg/makeDb/trackDb/mouse/mm10/encode3.atac.ra +++ src/hg/makeDb/trackDb/mouse/mm10/encode3.atac.ra @@ -1,35 +1,18 @@ # ATAC-Seq from Bing Ren's lab (ENCODE 3) track encode3RenAtac -release alpha -parent encode3Reg -compositeTrack on -longLabel Open chromatin in embryonic tissue (12 tissues, 8 ages) from ATAC-seq by ENCODE 3 (UCSD/Ren) -shortLabel Open Chromatin -type bed 3 -dragAndDrop subTracks -dimensions dimX=tissue dimY=age -subGroup1 tissue Tissue forebrain=forebrain midbrain=midbrain hindbrain=hindbrain neural=neural facial=facial limb=limb heart=heart kidney=kidney lung=lung liver=liver stomach=stomach intestine=intestine -subGroup2 age Age E10=E10.5 E11=E11.5 E12=E12.5 E13=E13.5 E14=E14.5 E15=E15.5 E16=E16.5 P0=P0 -subGroup3 view View peaks=Peaks signal=Signal -sortOrder tissue=+ age=+ view=- -group regulation -visibility hide - -track encode3RenAtac -release beta,public parent encode3Reg compositeTrack on longLabel Open chromatin in embryonic tissue (12 tissues, 8 ages) from ATAC-seq by ENCODE 3 (UCSD/Ren) shortLabel Open Chromatin type bed 3 dragAndDrop subTracks dimensions dimX=tissue dimY=age subGroup1 tissue Tissue forebrain=forebrain midbrain=midbrain hindbrain=hindbrain neural=neural facial=facial limb=limb heart=heart kidney=kidney lung=lung liver=liver stomach=stomach intestine=intestine subGroup2 age Age E10=E10.5 E11=E11.5 E12=E12.5 E13=E13.5 E14=E14.5 E15=E15.5 E16=E16.5 P0=P0 subGroup3 view View peaks=Peaks signal=Signal sortOrder tissue=+ age=+ view=- group regulation visibility full track encode3RenAtacPeaks