e5116de1d75b89b28693d3df2a3531f7b6c4a6eb gperez2 Fri Jun 5 11:49:58 2026 -0700 Restored the standalone ENCODE Expression superTrack on mm10 per team discussion on #37001. Added ENCODE3 Regulation and ENCODE4 Regulation as related tracks on mm10. Added a Released TBD pennantIcon on the mm10 and mm39 superTracks. refs #37001 diff --git src/hg/makeDb/trackDb/mouse/mm10/encode3.chromHmm.ra src/hg/makeDb/trackDb/mouse/mm10/encode3.chromHmm.ra index b1922a26c4c..41d3b3dcad8 100644 --- src/hg/makeDb/trackDb/mouse/mm10/encode3.chromHmm.ra +++ src/hg/makeDb/trackDb/mouse/mm10/encode3.chromHmm.ra @@ -1,39 +1,18 @@ # ChromHMM from Ren lab, based on ENCODE 3 data track encode3RenChromHmm -release alpha -parent encode3Reg -compositeTrack on -type bigBed 9 -longLabel Chromatin state of embryonic tissue (12 tissues, 8 ages) from ENCODE 3 (UCSD/Ren) -shortLabel Chromatin State -itemRgb on -dimensions dimX=tissue dimY=age -subGroup1 tissue Tissue forebrain=forebrain midbrain=midbrain hindbrain=hindbrain neural=neural facial=facial limb=limb heart=heart kidney=kidney lung=lung liver=liver stomach=stomach intestine=intestine -subGroup2 age Age E10=E10.5 E11=E11.5 E12=E12.5 E13=E13.5 E14=E14.5 E15=E15.5 E16=E16.5 P0=P0 -sortOrder tissue=+ age=+ -dragAndDrop subTracks -group regulation -labelOnFeature noDense -bedPackDense on -centerLabelsPack off -exonNumbers off -visibility hide - -track encode3RenChromHmm -release beta,public parent encode3Reg compositeTrack on type bigBed 9 longLabel Chromatin state of embryonic tissue (12 tissues, 8 ages) from ENCODE 3 (UCSD/Ren) shortLabel Chromatin State itemRgb on dimensions dimX=tissue dimY=age subGroup1 tissue Tissue forebrain=forebrain midbrain=midbrain hindbrain=hindbrain neural=neural facial=facial limb=limb heart=heart kidney=kidney lung=lung liver=liver stomach=stomach intestine=intestine subGroup2 age Age E10=E10.5 E11=E11.5 E12=E12.5 E13=E13.5 E14=E14.5 E15=E15.5 E16=E16.5 P0=P0 sortOrder tissue=+ age=+ dragAndDrop subTracks group regulation labelOnFeature noDense bedPackDense on centerLabelsPack off