42e67e7ac80677bec2f1d71e01dba92625f0078c gperez2 Thu Jul 23 11:10:20 2026 -0700 Hiding the default hg38 ENCODE3 Regulation supertrack now that ENCODE4 Regulation is on by default. refs #37845 refs #34923 diff --git src/hg/makeDb/trackDb/human/hg38/wgEncodeReg.ra src/hg/makeDb/trackDb/human/hg38/wgEncodeReg.ra index 308f628a465..249e2a4f95a 100644 --- src/hg/makeDb/trackDb/human/hg38/wgEncodeReg.ra +++ src/hg/makeDb/trackDb/human/hg38/wgEncodeReg.ra @@ -1,407 +1,407 @@ # ENCODE Integrated Regulation Track (Chris Eisenhart, Kate) track wgEncodeReg -superTrack on show +superTrack on hide shortLabel ENCODE3 Regulation longLabel Integrated Regulation from ENCODE3 group regulation priority 1 canPack On pennantIcon snowflake.png ../goldenPath/newsarch.html#072226 "Please see the ENCODE4 Regulation track for the latest data. See news archive for details." include wgEncodeRegDnase.ra track TFrPeakClusters shortLabel TF rPeak Clusters longLabel Transcription Factor Representative Peak (rPeak) Clusters (912 factors in 1152 biosamples) from ENCODE 4 type bigBed 12 + parent wgEncodeReg itemRgb on spectrum on scoreMin 1 scoreMax 1000 visibility hide mouseOverField factor labelFields factor bigDataUrl /gbdb/hg38/bbi/ENCODE4/TFrPeakClusters.bb decorator.default.bigDataUrl /gbdb/hg38/bbi/ENCODE4/TFrPeakClustersDecorator.bb detailsDynamicTable json_table|experiments support this rPeak urls exp="https://www.encodeproject.org/experiments/$$/" cCRE="https://screen.wenglab.org/search/?q=$$&assembly=GRCh38" factor="https://www.factorbook.org/tf/human/$$/function" html TFrPeakClusters.html filterValues.factor ADNP,AFF1,AFF4,AGO1,AGO2,AHDC1,AHR,AKAP8,AKNA,ARHGAP35,ARID1B,ARID2,ARID3A,ARID4A,ARID4B,ARID5B,ARNTL,ARNT,AR,ASH1L,ASH2L,ATF1,ATF2,ATF3,ATF4,ATF5,ATF6,ATF7,ATOH8,BACH1,BATF,BCL11A,BCL11B,BCL3,BCL6B,BCL6,BCLAF1,BCOR,BDP1,BHLHE40,BMI1,BNC2,BRCA1,BRCA2,BRD4,BRD9,C11orf30,CAMTA2,CBFA2T2,CBFA2T3,CBFB,CBX1,CBX2,CBX3,CBX5,CBX8,CC2D1A,CCAR2,CCNT2,CDC5L,CEBPA,CEBPB,CEBPD,CEBPG,CEBPZ,CERS6,CGGBP1,CHAMP1,CHD1,CHD2,CHD4,CHD7,CLOCK,CREB1,CREB3L1,CREB3,CREB5,CREM,CSDC2,CSDE1,CSRNP3,CTBP1,CTBP2,CTCFL,CTCF,CUX1,DACH1,DBP,DDIT3,DDX20,DEAF1,DEK,DIDO1,DLX6,DMAP1,DMTF1,DNMT1,DNMT3B,DPF2,DR1,DRAP1,DZIP1,E2F1,E2F2,E2F3,E2F4,E2F5,E2F6,E2F7,E2F8,E4F1,EBF1,EEA1,EED,EGR1,EGR2,EHF,EHMT2,ELF1,ELF2,ELF3,ELF4,ELK1,ELK4,EMX1,EP300,EP400,ERF,ERG,ESR1,ESRRA,ESRRG,ETS1,ETV1,ETV4,ETV5,ETV6,EZH2phosphoT487,EZH2,FEZF1,FIP1L1,FOSB,FOSL1,FOSL2,FOS,FOXA1,FOXA2,FOXA3,FOXC1,FOXF2,FOXJ2,FOXJ3,FOXK1,FOXK2,FOXM1,FOXO1,FOXO4,FOXP1,FOXP2,FOXP4,FOXS1,FUBP1,FUBP3,FUS,GABPA,GABPB1,GATA1,GATA2,GATA3,GATA4,GATAD1,GATAD2A,GATAD2B,GFI1B,GFI1,GLI2,GLI4,GLIS1,GLIS2,GLIS3,GLYR1,GMEB1,GMEB2,GPN1,GTF2A2,GTF2B,GTF2E2,GTF2F1,GTF2I,GTF3A,GTF3C2,GZF1,HBP1,HCFC1,HDAC1,HDAC2,HDAC3,HDAC6,HDAC8,HDGF,HES1,HES2,HES4,HEYL,HHEX,HIC1,HIC2,HINFP,HIVEP1,HLF,HLTF,HMBOX1,HMG20A,HMG20B,HMGA2,HMGN3,HMGXB3,HMGXB4,HNF1A,HNF1B,HNF4A,HNF4G,HNRNPH1,HNRNPK,HNRNPLL,HNRNPL,HNRNPUL1,HOMEZ,HOXA3,HOXA5,HOXA7,HOXB13,HOXB5,HOXD1,HSF1,HSF2,HSF4,ID3,IKZF1,IKZF2,IKZF3,IKZF4,IKZF5,ILF3,INSM2,IRF1,IRF2,IRF3,IRF4,IRF5,IRF9,ISL1,ISL2,ISX,JRK,JUNB,JUND,JUN,KAT2B,KAT7,KAT8,KDM1A,KDM2A,KDM2B,KDM3A,KDM4A,KDM4B,KDM5A,KDM5B,KDM6A,KHSRP,KIAA2018,KLF10,KLF11,KLF12,KLF13,KLF16,KLF17,KLF1,KLF4,KLF5,KLF6,KLF7,KLF8,KLF9,KMT2A,KMT2B,L3MBTL2,LARP7,LBX2,LCORL,LCOR,LEF1,LIN54,MAF1,MAFF,MAFG,MAFK,MAX,MAZ,MBD1,MBD2,MBD4,MED13,MED1,MEF2A,MEF2B,MEF2C,MEF2D,MEIS1,MEIS2,MGA,MIER1,MIER2,MIER3,MITF,MIXL1,MLLT1,MLXIP,MLX,MNT,MNX1,MSX2,MTA1,MTA2,MTA3,MTF1,MTF2,MXD1,MXD3,MXD4,MXI1,MYBL2,MYB,MYC,MYNN,MYRF,MZF1,NAIF1,NANOG,NBN,NCOA1,NCOA2,NCOA3,NCOA6,NCOR1,NEUROD1,NFAT5,NFATC1,NFATC3,NFATC4,NFE2L1,NFE2L2,NFE2,NFIA,NFIB,NFIC,NFIL3,NFIX,NFKB2,NFKBIZ,NFRKB,NFXL1,NFYA,NFYB,NFYC,NKRF,NKX3-1,NONO,NR0B2,NR1H2,NR2C1,NR2C2,NR2E3,NR2F1,NR2F2,NR2F6,NR3C1,NR4A1,NR5A1,NR5A2,NRF1,NRL,NUFIP1,ONECUT1,ONECUT2,OSR2,OTX2,OVOL1,OVOL3,PAF1,PATZ1,PAWR,PAX5,PAX8,PAXIP1,PBX1,PBX2,PBX3,PCBP1,PCBP2,PHB2,PHB,PHF20,PHF21A,PHF5A,PHF8,PITX1,PKNOX1,PLSCR1,PML,POGZ,POLR2AphosphoS2,POLR2AphosphoS5,POLR2A,POLR2B,POLR2G,POLR2H,POLR3A,POU2F2,POU5F1,POU6F1,PPARG,PRDM10,PRDM15,PRDM1,PRDM4,PRDM6,PRPF4,PRRX2,PTBP1,PTRF,PTTG1,PYGO2,RAD21,RAD51,RARA,RARB,RARG,RB1,RBAK,RBBP5,RBFOX2,RBM14,RBM22,RBM25,RBM39,RBPJ,RCOR1,RCOR2,RELA,RELB,REPIN1,RERE,REST,RFX1,RFX3,RFX5,RFXANK,RFXAP,RLF,RNF219,RNF2,RORA,RREB1,RUNX1,RUNX3,RXRA,RXRB,SAFB2,SAFB,SAP130,SAP30,SATB2,SCRT1,SCRT2,SETDB1,SFPQ,SHOX2,SIN3A,SIN3B,SIRT6,SIX1,SIX4,SIX5,SKIL,SKI,SMAD1,SMAD3,SMAD4,SMAD5,SMAD9,SMARCA4,SMARCA5,SMARCB1,SMARCC1,SMARCC2,SMARCE1,SMC3,SNAI1,SNAI2,SNAPC4,SNIP1,SOX13,SOX18,SOX5,SOX6,SP110,SP140L,SP1,SP2,SP3,SP4,SP5,SP7,SPDEF,SPEN,SPI1,SREBF1,SREBF2,SRF,SRSF1,SRSF3,SRSF4,SSRP1,STAG1,STAT1,STAT3,STAT5A,STAT5B,STAT6,SUPT5H,SUZ12,TAF15,TAF1,TAF7,TAF9B,TAL1,TARDBP,TBL1XR1,TBPL1,TBP,TBX18,TBX21,TBX2,TBX3,TCF12,TCF15,TCF3,TCF4,TCF7L2,TCF7,TEAD1,TEAD2,TEAD3,TEAD4,TEF,TFAP4,TFCP2L1,TFCP2,TFDP1,TFDP2,TFE3,TGIF2,THAP11,THAP12,THAP1,THAP7,THAP8,THAP9,THRAP3,THRA,THRB,TIGD3,TIGD6,TOE1,TOX2,TOX,TP53,TP63,TRAFD1,TRIM22,TRIM24,TRIM25,TRIM28,TSC22D2,TSHZ1,TSHZ2,U2AF1,U2AF2,UBTF,USF1,USF2,VEZF1,WIZ,WRNIP1,WT1,XBP1,XRCC5,YBX1,YEATS2,YEATS4,YY1,YY2,ZBED1,ZBED4,ZBED5,ZBTB10,ZBTB11,ZBTB12,ZBTB14,ZBTB17,ZBTB1,ZBTB20,ZBTB21,ZBTB24,ZBTB25,ZBTB26,ZBTB2,ZBTB33,ZBTB37,ZBTB38,ZBTB39,ZBTB3,ZBTB40,ZBTB42,ZBTB43,ZBTB44,ZBTB46,ZBTB48,ZBTB49,ZBTB4,ZBTB5,ZBTB6,ZBTB7A,ZBTB7B,ZBTB8A,ZBTB9,ZC3H10,ZC3H11A,ZC3H4,ZC3H8,ZCCHC11,ZEB1,ZEB2,ZFHX2,ZFP14,ZFP1,ZFP36L2,ZFP36,ZFP37,ZFP3,ZFP41,ZFP64,ZFP69B,ZFP82,ZFP91,ZFX,ZFY,ZGPAT,ZHX1,ZHX2,ZHX3,ZIC2,ZIK1,ZKSCAN1,ZKSCAN5,ZKSCAN8,ZMAT3,ZMIZ1,ZMYM2,ZMYM3,ZNF101,ZNF10,ZNF121,ZNF124,ZNF12,ZNF133,ZNF134,ZNF138,ZNF140,ZNF142,ZNF143,ZNF146,ZNF148,ZNF157,ZNF165,ZNF16,ZNF175,ZNF17,ZNF180,ZNF184,ZNF189,ZNF18,ZNF197,ZNF202,ZNF205,ZNF207,ZNF20,ZNF215,ZNF217,ZNF219,ZNF221,ZNF223,ZNF224,ZNF225,ZNF230,ZNF232,ZNF234,ZNF239,ZNF24,ZNF251,ZNF256,ZNF257,ZNF25,ZNF263,ZNF264,ZNF266,ZNF26,ZNF274,ZNF276,ZNF280A,ZNF280B,ZNF280D,ZNF281,ZNF282,ZNF296,ZNF2,ZNF30,ZNF311,ZNF316,ZNF317,ZNF318,ZNF319,ZNF324,ZNF329,ZNF331,ZNF333,ZNF335,ZNF337,ZNF33A,ZNF33B,ZNF341,ZNF343,ZNF34,ZNF350,ZNF354B,ZNF354C,ZNF362,ZNF366,ZNF367,ZNF383,ZNF384,ZNF391,ZNF394,ZNF395,ZNF397,ZNF398,ZNF3,ZNF407,ZNF414,ZNF416,ZNF41,ZNF423,ZNF426,ZNF430,ZNF431,ZNF433,ZNF441,ZNF444,ZNF445,ZNF446,ZNF449,ZNF44,ZNF451,ZNF460,ZNF462,ZNF483,ZNF484,ZNF485,ZNF488,ZNF48,ZNF490,ZNF501,ZNF503,ZNF507,ZNF510,ZNF511,ZNF512B,ZNF512,ZNF513,ZNF518A,ZNF526,ZNF529,ZNF530,ZNF532,ZNF543,ZNF547,ZNF548,ZNF549,ZNF550,ZNF552,ZNF555,ZNF556,ZNF557,ZNF558,ZNF561,ZNF569,ZNF570,ZNF572,ZNF574,ZNF576,ZNF579,ZNF580,ZNF583,ZNF584,ZNF585B,ZNF589,ZNF592,ZNF596,ZNF598,ZNF600,ZNF605,ZNF607,ZNF608,ZNF609,ZNF610,ZNF614,ZNF615,ZNF616,ZNF619,ZNF623,ZNF624,ZNF629,ZNF639,ZNF644,ZNF646,ZNF652,ZNF654,ZNF660,ZNF664,ZNF671,ZNF674,ZNF677,ZNF678,ZNF680,ZNF687,ZNF691,ZNF692,ZNF697,ZNF700,ZNF703,ZNF707,ZNF709,ZNF70,ZNF710,ZNF713,ZNF737,ZNF740,ZNF75A,ZNF761,ZNF764,ZNF766,ZNF768,ZNF76,ZNF770,ZNF772,ZNF773,ZNF775,ZNF776,ZNF777,ZNF778,ZNF781,ZNF782,ZNF784,ZNF785,ZNF786,ZNF788,ZNF791,ZNF792,ZNF79,ZNF7,ZNF800,ZNF816,ZNF830,ZNF839,ZNF83,ZNF843,ZNF84,ZNF850,ZNF865,ZNF883,ZNF891,ZNF8,ZSCAN12,ZSCAN16,ZSCAN18,ZSCAN20,ZSCAN21,ZSCAN22,ZSCAN23,ZSCAN29,ZSCAN30,ZSCAN31,ZSCAN32,ZSCAN4,ZSCAN5A,ZSCAN5C,ZSCAN9,ZXDB,ZXDC,ZZZ3 filterType.factor multipleListOr track wgEncodeRegTxn container multiWig noInherit on type bigWig 0 65500 parent wgEncodeReg shortLabel Transcription longLabel Transcription Levels Assayed by RNA-seq on 9 Cell Lines from ENCODE visibility hide maxHeightPixels 100:30:11 showSubtrackColorOnUi on aggregate transparentOverlay transformFunc LOG viewLimits 0:8 priority 1.1 dragAndDrop subTracks allButtonPair on pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegTxnCaltechRnaSeqGm12878R2x75Il200SigPooled shortLabel GM12878 longLabel Transcription of GM12878 cells from ENCODE parent wgEncodeRegTxn type bigWig 0 65535 priority 1 color 255,128,128 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegTxnCaltechRnaSeqH1hescR2x75Il200SigPooled shortLabel H1-hESC longLabel Transcription of H1-hESC cells from ENCODE parent wgEncodeRegTxn type bigWig 0 65535 priority 2 color 255,212,128 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegTxnCaltechRnaSeqHelas3R2x75Il200SigPooled shortLabel HeLa-S3 longLabel Transcription of HeLa-S3 cells from ENCODE parent wgEncodeRegTxn type bigWig 0 65535 priority 3 color 227,255,128 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegTxnCaltechRnaSeqHepg2R2x75Il200SigPooled shortLabel HepG2 longLabel Transcription of HepG2 cells from ENCODE parent wgEncodeRegTxn type bigWig 0 65535 priority 4 color 128,255,149 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegTxnCaltechRnaSeqHsmmR2x75Il200SigPooled shortLabel HSMM longLabel Transcription of HSMM cells from ENCODE parent wgEncodeRegTxn type bigWig 0 65535 priority 5 color 128,255,242 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegTxnCaltechRnaSeqHuvecR2x75Il200SigPooled shortLabel HUVEC longLabel Transcription of HUVEC cells from ENCODE parent wgEncodeRegTxn type bigWig 0 65535 priority 6 color 128,199,255 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegTxnCaltechRnaSeqK562R2x75Il200SigPooled shortLabel K562 longLabel Transcription of K562 cells from ENCODE parent wgEncodeRegTxn type bigWig 0 65535 priority 7 color 149,128,255 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegTxnCaltechRnaSeqNhekR2x75Il200SigPooled shortLabel NHEK longLabel Transcription of NHEK cells from ENCODE parent wgEncodeRegTxn type bigWig 0 65535 priority 8 color 227,128,255 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegTxnCaltechRnaSeqNhlfR2x75Il200SigPooled shortLabel NHLF longLabel Transcription of NHLF cells from ENCODE parent wgEncodeRegTxn type bigWig 0 65535 priority 9 color 255,128,212 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me1 container multiWig noInherit on type bigWig 0 10000 superTrack wgEncodeReg hide shortLabel Layered H3K4Me1 longLabel H3K4Me1 Mark (Often Found Near Regulatory Elements) on 7 cell lines from ENCODE visibility hide viewLimits 0:50 maxHeightPixels 100:30:11 aggregate transparentOverlay showSubtrackColorOnUi on priority 1.2 dragAndDrop subtracks allButtonPair on pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 #track wgEncodeRegMarkH3k4me1Gm12878 track wgEncodeBroadHistoneGm12878H3k4me1StdSig shortLabel GM12878 longLabel H3K4Me1 Mark (Often Found Near Regulatory Elements) on GM12878 Cells from ENCODE parent wgEncodeRegMarkH3k4me1 color 255,128,128 type bigWig 0 5199 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me1H1hesc table wgEncodeBroadHistoneH1hescH3k4me1StdSig shortLabel H1-hESC longLabel H3K4Me1 Mark (Often Found Near Regulatory Elements) on H1-hESC Cells from ENCODE parent wgEncodeRegMarkH3k4me1 color 255,212,128 type bigWig 0 8355 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me1Hsmm table wgEncodeBroadHistoneHsmmH3k4me1StdSig shortLabel HSMM longLabel H3K4Me1 Mark (Often Found Near Regulatory Elements) on HSMM Cells from ENCODE parent wgEncodeRegMarkH3k4me1 color 120,235,204 type bigWig 0 6265 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me1Huvec table wgEncodeBroadHistoneHuvecH3k4me1StdSig shortLabel HUVEC longLabel H3K4Me1 Mark (Often Found Near Regulatory Elements) on HUVEC Cells from ENCODE parent wgEncodeRegMarkH3k4me1 color 128,212,255 type bigWig 0 4666 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me1K562 table wgEncodeBroadHistoneK562H3k4me1StdSig shortLabel K562 longLabel H3K4Me1 Mark (Often Found Near Regulatory Elements) on K562 Cells from ENCODE parent wgEncodeRegMarkH3k4me1 color 128,128,255 type bigWig 0 5716 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me1Nhek table wgEncodeBroadHistoneNhekH3k4me1StdSig shortLabel NHEK longLabel H3K4Me1 Mark (Often Found Near Regulatory Elements) on NHEK Cells from ENCODE parent wgEncodeRegMarkH3k4me1 color 212,128,255 type bigWig 0 2669 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me1Nhlf table wgEncodeBroadHistoneNhlfH3k4me1StdSig shortLabel NHLF longLabel H3K4Me1 Mark (Often Found Near Regulatory Elements) on NHLF Cells from ENCODE parent wgEncodeRegMarkH3k4me1 color 255,128,212 type bigWig 0 6866 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me3 container multiWig noInherit on type bigWig 0 10000 superTrack wgEncodeReg hide shortLabel Layered H3K4Me3 longLabel H3K4Me3 Mark (Often Found Near Promoters) on 7 cell lines from ENCODE visibility hide viewLimits 0:150 maxHeightPixels 100:30:11 aggregate transparentOverlay showSubtrackColorOnUi on priority 1.3 dragAndDrop subtracks allButtonPair on pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 #track wgEncodeRegMarkH3k4me3Gm12878 track wgEncodeBroadHistoneGm12878H3k4me3StdSig shortLabel GM12878 longLabel H3K4Me3 Mark (Often Found Near Regulatory Elements) on GM12878 Cells from ENCODE parent wgEncodeRegMarkH3k4me3 color 255,128,128 type bigWig 0 5199 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me3H1hesc table wgEncodeBroadHistoneH1hescH3k4me3StdSig shortLabel H1-hESC longLabel H3K4Me3 Mark (Often Found Near Promoters) on H1-hESC Cells from ENCODE parent wgEncodeRegMarkH3k4me3 color 255,212,128 type bigWig 0 6957 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me3Hsmm table wgEncodeBroadHistoneHsmmH3k4me3StdSig shortLabel HSMM longLabel H3K4Me3 Mark (Often Found Near Promoters) on HSMM Cells from ENCODE parent wgEncodeRegMarkH3k4me3 color 120,235,204 type bigWig 0 25995 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me3Huvec table wgEncodeBroadHistoneHuvecH3k4me3StdSig shortLabel HUVEC longLabel H3K4Me3 Mark (Often Found Near Promoters) on HUVEC Cells from ENCODE parent wgEncodeRegMarkH3k4me3 color 128,212,255 type bigWig 0 7852 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me3K562 table wgEncodeBroadHistoneK562H3k4me3StdSig shortLabel K562 longLabel H3K4Me3 Mark (Often Found Near Promoters) on K562 Cells from ENCODE parent wgEncodeRegMarkH3k4me3 color 128,128,255 type bigWig 0 9918 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me3Nhek table wgEncodeBroadHistoneNhekH3k4me3StdSig shortLabel NHEK longLabel H3K4Me3 Mark (Often Found Near Promoters) on NHEK Cells from ENCODE parent wgEncodeRegMarkH3k4me3 color 212,128,255 type bigWig 0 8230 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k4me3Nhlf table wgEncodeBroadHistoneNhlfH3k4me3StdSig shortLabel NHLF longLabel H3K4Me3 Mark (Often Found Near Promoters) on NHLF Cells from ENCODE parent wgEncodeRegMarkH3k4me3 color 255,128,212 type bigWig 0 19229 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k27ac container multiWig noInherit on type bigWig 0 10000 superTrack wgEncodeReg full shortLabel Layered H3K27Ac longLabel H3K27Ac Mark (Often Found Near Regulatory Elements) on 7 cell lines from ENCODE visibility full viewLimits 0:100 maxHeightPixels 100:30:11 aggregate transparentOverlay showSubtrackColorOnUi on priority 1.4 dragAndDrop subtracks allButtonPair on pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k27acGm12878 table wgEncodeBroadHistoneGm12878H3k27acStdSig shortLabel GM12878 longLabel H3K27Ac Mark (Often Found Near Regulatory Elements) on GM12878 Cells from ENCODE parent wgEncodeRegMarkH3k27ac color 255,128,128 type bigWig 0 223899 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k27acH1hesc table wgEncodeBroadHistoneH1hescH3k27acStdSig shortLabel H1-hESC longLabel H3K27Ac Mark (Often Found Near Regulatory Elements) on H1-hESC Cells from ENCODE parent wgEncodeRegMarkH3k27ac color 255,212,128 type bigWig 0 14898 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k27acHsmm table wgEncodeBroadHistoneHsmmH3k27acStdSig shortLabel HSMM longLabel H3K27Ac Mark (Often Found Near Regulatory Elements) on HSMM Cells from ENCODE parent wgEncodeRegMarkH3k27ac color 120,235,204 type bigWig 0 5448 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k27acHuvec table wgEncodeBroadHistoneHuvecH3k27acStdSig shortLabel HUVEC longLabel H3K27Ac Mark (Often Found Near Regulatory Elements) on HUVEC Cells from ENCODE parent wgEncodeRegMarkH3k27ac color 128,212,255 type bigWig 0 3721 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k27acK562 table wgEncodeBroadHistoneK562H3k27acStdSig shortLabel K562 longLabel H3K27Ac Mark (Often Found Near Regulatory Elements) on K562 Cells from ENCODE parent wgEncodeRegMarkH3k27ac color 128,128,255 type bigWig 0 6249 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k27acNhek table wgEncodeBroadHistoneNhekH3k27acStdSig shortLabel NHEK longLabel H3K27Ac Mark (Often Found Near Regulatory Elements) on NHEK Cells from ENCODE parent wgEncodeRegMarkH3k27ac color 212,128,255 type bigWig 0 23439 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19 track wgEncodeRegMarkH3k27acNhlf table wgEncodeBroadHistoneNhlfH3k27acStdSig shortLabel NHLF longLabel H3K27Ac Mark (Often Found Near Regulatory Elements) on NHLF Cells from ENCODE parent wgEncodeRegMarkH3k27ac color 255,128,212 type bigWig 0 3851 pennantIcon 19.jpg ../goldenPath/help/liftOver.html "lifted from hg19" origAssembly hg19