710dd5a15d434aa67588901bd85a5ec1dfb26357
gperez2
  Mon Mar 9 18:11:59 2026 -0700
Forgot to commit the Human Methylation Atlas Signals track description page, and remove the humanMethylationAtlas.ra/humanMethylationAtlas.html files in my last commit for the DNA Methylation track, refs #36826

diff --git src/hg/makeDb/trackDb/human/humanMethylationAtlas.ra src/hg/makeDb/trackDb/human/humanMethylationAtlas.ra
deleted file mode 100755
index bdbaf8efd12..00000000000
--- src/hg/makeDb/trackDb/human/humanMethylationAtlas.ra
+++ /dev/null
@@ -1,49 +0,0 @@
-track humanMethylationAtlasSummary
-priority 1
-parent dnaMethylation
-shortLabel Human Methylation Atlas Summary
-longLabel Human Methylation Atlas summary regions and enhancers
-visibility pack
-compositeTrack on
-type bigBed 4 .
-dataVersion Data release version 2
-showCfg on
-html humanMethylationAtlas.html
-
-track hmaSummaryUnmethylated
-priority 1
-type bigBed 9 .
-itemRgb on
-shortLabel Unmethylated regions
-longLabel All unmethylated regions
-parent humanMethylationAtlasSummary on
-bigDataUrl /gbdb/$D/dnaMethylationAtlas/hmaSummaryUnmethylated.bb
-visibility dense
-filterLabel.name Cell/Tissue Type
-filterValues.name Adipocytes,Bladder-Ep,Blood-B,Blood-Granul,Blood-Mono+Macro,Blood-NK,Blood-T,Bone-Osteob,Breast-Basal-Ep,Breast-Luminal-Ep,Colon-Ep,Colon-Fibro,Dermal-Fibro,Endothel,Epid-Kerat,Eryth-prog,Fallopian-Ep,Gallbladder,Gastric-Ep,Head-Neck-Ep,Heart-Cardio,Heart-Fibro,Kidney-Ep,Liver-Hep,Lung-Ep-Alveo,Lung-Ep-Bron,Neuron,Oligodend,Ovary-Ep,Pancreas-Acinar,Pancreas-Alpha,Pancreas-Beta,Pancreas-Delta,Pancreas-Duct,Prostate-Ep,Skeletal-Musc,Small-Int-Ep,Smooth-Musc,Thyroid-Ep
-
-track hmaSummaryPutEnhancers
-priority 2
-type bigBed 9 .
-itemRgb on
-shortLabel Putative enhancers
-longLabel Putative enhancers from unmethylated regions
-parent humanMethylationAtlasSummary on
-bigDataUrl /gbdb/$D/dnaMethylationAtlas/hmaSummaryPutEnhancers.bb
-visibility dense
-filterLabel.name Cell/Tissue Type
-filterValues.name Bladder-Ep,Blood-B,Blood-Granul,Blood-Mono+Macro,Blood-NK,Blood-T,Breast-Basal-Ep,Breast-Luminal-Ep,Colon-Ep,Colon-Fibro,Dermal-Fibro,Endothel,Epid-Kerat,Gastric-Ep,Head-Neck-Ep,Heart-Cardio,Heart-Fibro,Kidney-Ep,Liver-Hep,Lung-Ep-Alveo,Lung-Ep-Bron,Neuron,Oligodend,Pancreas-Acinar,Pancreas-Alpha,Pancreas-Beta,Pancreas-Delta,Pancreas-Duct,Prostate-Ep,Skeletal-Musc,Small-Int-Ep,Thyroid-Ep
-
-track hmaSummaryU250
-priority 3
-type bigBed 9 .
-itemRgb on
-shortLabel Top 250 U markers per cell type
-longLabel Top 250 unmethylated regions specific to each cell type
-parent humanMethylationAtlasSummary on
-bigDataUrl /gbdb/$D/dnaMethylationAtlas/hmaSummaryU250.bb
-visibility dense
-filterLabel.name Cell/Tissue Type
-filterValues.name Adipocytes,Bladder-Ep,Blood-B,Blood-Granul,Blood-Mono+Macro,Blood-NK,Blood-T,Bone-Osteob,Breast-Basal-Ep,Breast-Basal-Ep:Breast-Luminal-Ep,Breast-Luminal-Ep,Colon-Ep,Colon-Ep:Gastric-Ep:Small-Int-Ep,Colon-Ep:Small-Int-Ep,Colon-Fibro,Colon-Fibro:Heart-Fibro,Dermal-Fibro,Endothel,Epid-Kerat,Eryth-prog,Fallopian-Ep,Fallopian-Ep:Ovary-Ep,Gallbladder,Gastric-Ep,Gastric-Ep:Small-Int-Ep,Head-Neck-Ep,Heart-Cardio,Heart-Cardio:Heart-Fibro,Heart-Cardio:Skeletal-Musc:Smooth-Musc,Heart-Fibro,Kidney-Ep,Liver-Hep,Lung-Ep-Alveo,Lung-Ep-Alveo:Lung-Ep-Bron,Lung-Ep-Bron,Neuron,Neuron:Oligodend,Oligodend,Ovary-Ep,Pancreas-Acinar,Pancreas-Alpha,Pancreas-Alpha:Pancreas-Beta:Pancreas-Delta,Pancreas-Beta,Pancreas-Delta,Pancreas-Duct,Prostate-Ep,Skeletal-Musc,Skeletal-Musc:Smooth-Musc,Small-Int-Ep,Smooth-Musc,Thyroid-Ep
-
-include methylationAtlasSignals.ra