619974f143583b4a32568613691e447986a75ac2
hiram
  Wed Aug 12 16:04:56 2026 -0700
fixups per code review refs #38005

diff --git src/hg/lib/assemblySummary.as src/hg/lib/assemblySummary.as
index a670add923f..ea797f2f883 100644
--- src/hg/lib/assemblySummary.as
+++ src/hg/lib/assemblySummary.as
@@ -5,38 +5,38 @@
     string bioproject;	"www.ncbi.nlm.nih.gov/bioproject/?term=xxx"
     string biosample;	"www.ncbi.nlm.nih.gov/biosample/?term=xxx"
     string wgsMaster;	"www.ncbi.nlm.nih.gov/nuccore/xxx"
     string refseqCategory;	"representative or reference"
     uint taxId index;	"www.ncbi.nlm.nih.gov/taxonomy/?term=xxx"
     uint speciesTaxid;	"www.ncbi.nlm.nih.gov/taxonomy/?term=xxx"
     string organismName index[100];	"binomial scientific name"
     string infraspecificName;	"strain/cultivar/ecotype/breed"
     string isolate;	"source of sample"
     string versionStatus;	"latest/suppressed/replaced"
     string assemblyLevel index;	"Contig/Scaffold/Complete Genome/Chromosome"
     string releaseType;	"Major/Minor/Patch"
     string genomeRep;	"Full/Partial"
     string seqRelDate;	"date YYYY-MM-DD sequence released to INSDC"
     string asmName;	"submitter supplied name"
-    string asmSubmitter;	"institution submitting assembly"
+    lstring asmSubmitter;	"institution submitting assembly"
     string gbrsPairedAsm;	"GenBank<->RefSeq GCA/GCF relationship"
     string pairedAsmComp;	"identical/different for GCA<->GCF relationship"
     string ftpPath;	"ftp.ncbi.nlm.nih.gov/genomes/all/GCx/012/345/678/asmId"
-    string excludedFromRefseq;	"noted reason for exclusion from RefSeq"
+    lstring excludedFromRefseq;	"noted reason for exclusion from RefSeq"
     string relationToTypeMaterial;	"note of assembly relation to sample"
     string asmNotLiveDate;	"date YYYY-MM-DD assembly suppressed/replaced -- historical files only"
     string assemblyType;	"haploid/diploid/haploid-with-alt-loci/alternate-pseudohaplotype"
     string taxonGroup index;	"bacteria/viral/archaea/fungi/metagenomes/invertebrate/other/vertebrate_other/plant/vertebrate_mammalian/protozoa"
     bigint genomeSize;	"total length of all top-level sequences in the primary assembly"
     bigint genomeSizeUngapped;	"genome length not counting gaps (gap == 10 or more Ns)"
     float gcPercent;	"GC percent"
-    ushort repliconCount;	"total number of chromosomes, organelle genomes and plasmids"
+    uint repliconCount;	"total number of chromosomes, organelle genomes and plasmids"
     uint scaffoldCount;	"number of scaffolds: placed, unlocalized, unplaced, alternate loci and patch"
     uint contigCount;	"number of contigs in the primary assembly"
     string annotationProvider;	"the group that provided the annotation on the assembly"
     string annotationName;	"the name of the annotation"
     string annotationDate;	"annotation date YYYY-MM-DD"
     uint totalGeneCount;	"total gene count in annotation"
     uint proteinCodingGeneCount;	"protein coding gene count in annotation"
     uint nonCodingGeneCount;	"non coding gene count in annotation"
     lstring pubmedId;	"semicolon separated list of PubMed ID(s)"
     )