a36006a7ddfa0c559bdc43f9437eb476b53e0d52 hiram Thu Apr 10 13:33:50 2025 -0700 VGP update refs #29545 diff --git src/hg/makeDb/doc/asmHubs/master.run.list src/hg/makeDb/doc/asmHubs/master.run.list index 63cae92de54..f4c1423518e 100644 --- src/hg/makeDb/doc/asmHubs/master.run.list +++ src/hg/makeDb/doc/asmHubs/master.run.list @@ -982,30 +982,31 @@ ./runBuild GCA_013030995.1_ASM1303099v1 birds Anser_cygnoides ./runBuild GCA_013099955.1_tgrh88 invertebrate Toxoplasma_gondii ./runBuild GCA_013177555.1_ASM1317755v1 fungi Candida_tropicalis ./runBuild GCA_013276365.2_UNSW_CanFamBas_1.2 mammals Canis_lupus_familiaris ./runBuild GCA_013282895.1_WAA_JIC_1.0 invertebrate Eriosoma_lanigerum ./runBuild GCA_013339685.2_BIME_Hyas_1.3 invertebrate Hyalomma_asiaticum ./runBuild GCA_013339725.1_BIME_Rmic_1.3 invertebrate Rhipicephalus_microplus ./runBuild GCA_013339765.2_BIME_HaeL_1.3 invertebrate Haemaphysalis_longicornis ./runBuild GCA_013339895.1_Emu_genome_v1 invertebrate Ephydatia_muelleri ./runBuild GCA_013347815.1_fAntMac1.alt fish Antennarius_maculatus ./runBuild GCA_013347855.1_fAngAng1.pri vertebrate Anguilla_anguilla ./runBuild GCA_013347865.1_fAngAng1.alt vertebrate Anguilla_anguilla ./runBuild GCA_013347915.1_fEleEle1.alt fish Electrophorus_electricus ./runBuild GCA_013358655.1_ASM1335865v1 invertebrate Trypanosoma_cruzi ./runBuild GCA_013358685.1_fAntMac1.pri fish Antennarius_maculatus +./runBuild GCA_013358815.1_fEleEle1.pri fish Electrophorus_electricus ./runBuild GCA_013358835.2_BIME_Iper_1.3 invertebrate Ixodes_persulcatus ./runBuild GCA_013368575.1_fMegCyp1.alt vertebrate Megalops_cyprinoides ./runBuild GCA_013368595.1_bNycGra1.alt birds Nyctibius_grandis ./runBuild GCA_013368605.1_bNycGra1.pri birds Nyctibius_grandis ./runBuild GCA_013371645.1_OryCun3.0 mammals Oryctolagus_cuniculus_cuniculus ./runBuild GCA_013396185.1_ASM1339618v1 fungi Fusarium_circinatum ./runBuild GCA_013407035.1_ASM1340703v1 birds Coloeus_monedula ./runBuild GCA_013425905.1_ASM1342590v1 invertebrate Oscheius_tipulae ./runBuild GCA_013435995.1_ASM1343599v1 invertebrate Rhipicephalus_microplus ./runBuild GCA_013436015.1_TxGen_Rann invertebrate Rhipicephalus_annulatus ./runBuild GCA_013436055.1_Harore_MTP2014 invertebrate Halocynthia_roretzi ./runBuild GCA_013436065.1_Haaura_MTP2014 invertebrate Halocynthia_aurantium ./runBuild GCA_013621005.1_IRD_Aeve_1.1 plants Aeschynomene_evenia ./runBuild GCA_013621035.1_C_magur1.0 fish Clarias_magur ./runBuild GCA_014060925.1_Heter_glaber.v1.7_hic_pac mammals Heterocephalus_glaber @@ -1431,30 +1432,32 @@ ./runBuild GCA_023783535.1_ASM2378353v1 primates Cercopithecus_albogularis ./runBuild GCA_023783555.1_ASM2378355v1 primates Ateles_geoffroyi ./runBuild GCA_023783575.1_ASM2378357v1 primates Cebus_albifrons ./runBuild GCA_023807365.1_ASM2380736v1 primates Macaca_silenus ./runBuild GCA_023851605.1_mTamTet1.pri mammals Tamandua_tetradactyla ./runBuild GCA_023853755.1_mTamTet1.alt mammals Tamandua_tetradactyla ./runBuild GCA_023856395.1_Psun_UM_1.1 mammals Phodopus_sungorus ./runBuild GCA_023898255.1_ASM2389825v1 primates Nycticebus_bengalensis ./runBuild GCA_023920165.1_ASM2392016v1 fungi Curvularia_clavata ./runBuild GCA_023969395.1_ASM2396939v1 invertebrate Amblyomma_maculatum ./runBuild GCA_024140225.1_mSunEtr1.alt.cur mammals Suncus_etruscus ./runBuild GCA_024166345.1_mEleMax1_alternate_haplotype mammals Elephas_maximus_indicus ./runBuild GCA_024206055.2_GGswu birds Gallus_gallus ./runBuild GCA_024217435.4_RoL_Ssco_1.2 fish Syngnathus_scovelli ./runBuild GCA_024243835.1_ebre_JUm2551 fungi Enteropsectra_breve +./runBuild GCA_024256435.1_CGAR_Hap1 fish Clarias_gariepinus +./runBuild GCA_024256465.1_CGAR_Hap2 fish Clarias_gariepinus ./runBuild GCA_024294585.1_rVipLat1.pri vertebrate Vipera_latastei ./runBuild GCA_024294605.1_rVipLat1.alt vertebrate Vipera_latastei ./runBuild GCA_024362935.1_bSetPet1.0.p birds Setophaga_petechia ./runBuild GCA_024362995.1_drHetArbu1.0.p plants Heteromeles_arbutifolia ./runBuild GCA_024363235.1_drHetArbu1.0.a plants Heteromeles_arbutifolia ./runBuild GCA_024363435.1_mPerLon1.0.a mammals Perognathus_longimembris ./runBuild GCA_024363575.1_mPerLon1.0.p mammals Perognathus_longimembris ./runBuild GCA_024364735.1_CEBAR_Bro_1.0 plants Boesenbergia_rotund ./runBuild GCA_024372515.1_bSetPet1.0.a birds Setophaga_petechia ./runBuild GCA_024453875.1_ASM2445387v1 fish Scardinius_erythrophthalmus ./runBuild GCA_024500485.1_ASM2450048v1 mammals Vulpes_ferrilata ./runBuild GCA_024509115.1_rCroOre1.0.p vertebrate Crotalus_oreganus_helleri ./runBuild GCA_024509165.1_rCroOre1.a vertebrate Crotalus_oreganus_helleri ./runBuild GCA_024516155.1_Pyrom1 fungi Pyronema_omphalodes ./runBuild GCA_024586265.1_ASM2458626v1 invertebrate Babesia_duncani @@ -1718,52 +1721,54 @@ ./runBuild GCA_031010765.1_BD_1.0 mammals Canis_lupus_familiaris ./runBuild GCA_031021085.1_rEryReg1.hap2 vertebrate Erythrolamprus_reginae ./runBuild GCA_031021105.1_rEryReg1.hap1 vertebrate Erythrolamprus_reginae ./runBuild GCA_031109255.1_ASM3110925v1 viral Enterovirus_A71 ./runBuild GCA_031116425.1_ASM3111642v1 viral Enterovirus_5865_sin_000009 ./runBuild GCA_031116435.1_ASM3111643v1 viral Enterovirus_5666_sin_002209 ./runBuild GCA_031116565.1_ASM3111656v1 viral Alkhumra_hemorrhagic_fever_virus ./runBuild GCA_031121245.1_ASM3112124v1 viral Lake_Victoria_marburgvirus_-_Angola2005 ./runBuild GCA_031121255.1_ASM3112125v1 viral Lake_Victoria_marburgvirus_-_DRC1999 ./runBuild GCA_031121995.1_ASM3112199v1 viral Lake_Victoria_marburgvirus_-_Ci67 ./runBuild GCA_031128755.1_ASM3112875v1 viral Human_enterovirus_71_HZ08_Hangzhou_2008 ./runBuild GCA_031129775.1_ASM3112977v1 viral Lake_Victoria_marburgvirus_-_Leiden ./runBuild GCA_031165255.1_Yella_v2 mammals Canis_lupus_familiaris ./runBuild GCA_031190585.1_ASM3119058v1 viral Carnivore_chapparvovirus_1 ./runBuild GCA_031213475.1_uoNerLuet1.0 invertebrate Saccharina_latissima +./runBuild GCA_031216445.1_YSFRI_Lmacu_1.1 fish Lateolabrax_maculatus ./runBuild GCA_031319335.1_ASM3131933v1 viral Langya_virus ./runBuild GCA_031322265.1_ASM3132226v1 viral Capira_virus ./runBuild GCA_031468805.1_bMorBas2.hap1 birds Morus_bassanus ./runBuild GCA_031468815.1_bMorBas2.hap2 birds Morus_bassanus ./runBuild GCA_031580275.1_ASM3158027v1 viral Dandenong_virus ./runBuild GCA_031763025.1_ASM3176302v1 invertebrate Macrocystis_pyrifera ./runBuild GCA_031835075.1_ASM3183507v1 primates Saguinus_oedipus ./runBuild GCA_031876335.1_mHipLar1.pri mammals Hipposideros_larvatus ./runBuild GCA_031877785.1_bStrAlu1.hap2 birds Strix_aluco ./runBuild GCA_031877795.1_bStrAlu1.hap1 birds Strix_aluco ./runBuild GCA_031878655.1_mTapInd1.hap1 mammals Tapirus_indicus ./runBuild GCA_031878665.1_mThoBot2.hap2 mammals Thomomys_bottae ./runBuild GCA_031878675.1_mThoBot2.hap1 mammals Thomomys_bottae ./runBuild GCA_031878705.1_mTapInd1.hap2 mammals Tapirus_indicus ./runBuild GCA_031885435.1_bPasSan2.pri birds Passerculus_sandwichensis ./runBuild GCA_031893025.1_aLepFus1.hap1 vertebrate Leptodactylus_fuscus ./runBuild GCA_031893055.1_aLepFus1.hap2 vertebrate Leptodactylus_fuscus ./runBuild GCA_032106395.1_ASM3210639v1 viral Camel_Crimean-Congo_hemorrhagic_fever_orthonairovirus ./runBuild GCA_032164245.1_rSteOdo2_p1.0 vertebrate Sternotherus_odoratus ./runBuild GCA_032191455.1_ICIPE_MspMB_1.0 fungi Microsporidia_sp._MB ./runBuild GCA_032313775.1_UCinereo1.0 mammals Urocyon_cinereoargenteus ./runBuild GCA_032444005.1_aRanImi1.pri vertebrate Ranitomeya_imitator +./runBuild GCA_032719375.1_Trm_1.0 birds Columba_livia ./runBuild GCA_033296515.1_rMacSuw1.hap1 vertebrate Macrochelys_suwanniensis ./runBuild GCA_033349115.1_rMacSuw1.hap2 vertebrate Macrochelys_suwanniensis ./runBuild GCA_033958435.1_ASM3395843v1 vertebrate Carettochelys_insculpta ./runBuild GCA_034376525.1_ASM3437652v1 plants Nicotiana_benthamiana ./runBuild GCA_034509865.1_ASM3450986v1 birds Gallus_gallus ./runBuild GCA_034619455.1_bLepDis1.hap1 birds Leptosomus_discolor ./runBuild GCA_034619465.1_bLepDis1.hap2 birds Leptosomus_discolor ./runBuild GCA_034620425.1_Cla-1 mammals Canis_latrans ./runBuild GCA_034768055.1_ILVO_Slat_1.0 invertebrate Saccharina_latissima ./runBuild GCA_034782035.1_ASM3478203v1 birds Falco_sparverius ./runBuild GCA_035046495.1_rTilSci1.hap1 vertebrate Tiliqua_scincoides ./runBuild GCA_035046505.1_rTilSci1.hap2 vertebrate Tiliqua_scincoides ./runBuild GCA_035047305.1_BraPum1.0 vertebrate Bradypodion_pumilum ./runBuild GCA_035047345.1_BraVen1.1 vertebrate Bradypodion_ventrale ./runBuild GCA_035048815.1_WUR_AEscu_1 plants Abelmoschus_esculentus @@ -1869,36 +1874,41 @@ ./runBuild GCA_039906515.1_mPseCra1.hap1 mammals Pseudorca_crassidens ./runBuild GCA_039906525.1_mPseCra1.hap2 mammals Pseudorca_crassidens ./runBuild GCA_039906565.1_bAegAlb1.hap1 birds Aegotheles_albertisi ./runBuild GCA_040206675.1_aAscTru1.hap2 vertebrate Ascaphus_truei ./runBuild GCA_040206685.1_aAscTru1.hap1 vertebrate Ascaphus_truei ./runBuild GCA_040207535.1_USC_Ccil_1.0 vertebrate Correlophus_ciliatus ./runBuild GCA_040436485.1_ASM4043648v1 invertebrate Corcyra_cephalonica ./runBuild GCA_040807015.1_bStrCam1.hap2 birds Struthio_camelus ./runBuild GCA_040894005.1_aEngPut4.maternal vertebrate Engystomops_pustulosus ./runBuild GCA_040894015.1_aEngPut4.paternal vertebrate Engystomops_pustulosus ./runBuild GCA_040894355.1_rMyuGeo1.pri.20230808 vertebrate Myuchelys_georgesi ./runBuild GCA_040894355.2_rMyuGeo1.pri vertebrate Myuchelys_georgesi ./runBuild GCA_040937895.1_aHypRig1.alt vertebrate Hyperolius_riggenbachi ./runBuild GCA_040939525.1_ASM4093952v1 vertebrate Protopterus_annectens ./runBuild GCA_040954595.1_ASM4095459v1 invertebrate Saccoglossus_sp._HW-2024a +./runBuild GCA_040954595.2_keBalMisa1.hap2 invertebrate Saccoglossus_sp._HW-2024a ./runBuild GCA_040954625.1_ASM4095462v1 invertebrate Saccoglossus_sp._HW-2024a +./runBuild GCA_040954625.2_keBalMisa1.hap1 invertebrate Saccoglossus_sp._HW-2024a ./runBuild GCA_040954845.1_fLepOcu1.hap1 vertebrate Lepisosteus_oculatus ./runBuild GCA_040955645.1_LycPic1.final.hap1 mammals Lycaon_pictus ./runBuild GCA_040955705.1_LycPic1.final.hap2 mammals Lycaon_pictus ./runBuild GCA_041222355.1_F344_StmMcwi mammals Rattus_norvegicus +./runBuild GCA_041753875.1_ASM4175387v1 fish Acanthopagrus_schlegelii ./runBuild GCA_041834305.1_ASM4183430v1 mammals Megaptera_novaeangliae +./runBuild GCA_041902795.1_ASM4190279v1 fish Electrophorus_electricus +./runBuild GCA_041903045.1_ASM4190304v1 fish Epinephelus_lanceolatus ./runBuild GCA_042242105.1_fPemKlu1.hap1 fish Pempheris_klunzingeri ./runBuild GCA_042242115.1_fArrGeo1.hap1 fish Arripis_georgiana ./runBuild GCA_042242125.1_fPemKlu1.hap2 fish Pempheris_klunzingeri ./runBuild GCA_042242135.1_fArrGeo1.hap2 fish Arripis_georgiana ./runBuild GCA_043159975.1_mMacNem.hap1 primates Macaca_nemestrina ./runBuild GCA_043161795.1_mMacNem.hap2 primates Macaca_nemestrina ./runBuild GCA_043250625.1_fSebFas1.pri fish Sebastes_fasciatus ./runBuild GCA_043290065.1_mRhyPet1.hap2 mammals Rhynchocyon_petersi ./runBuild GCA_043290085.1_mRhyPet1.hap1 mammals Rhynchocyon_petersi ./runBuild GCA_043640875.1_fEnoArm2.hap2 fish Enoplosus_armatus ./runBuild GCA_043727835.1_ASM4372783v1 mammals Aselliscus_stoliczkanus ./runBuild GCA_043727955.1_ASM4372795v1 mammals Hipposideros_larvatus ./runBuild GCA_043728065.1_ASM4372806v1 mammals Rhinolophus_affinis ./runBuild GCA_043728145.1_ASM4372814v1 mammals Rhinolophus_trifoliatus ./runBuild GCA_043748575.1_ASM4374857v1 mammals Rhinolophus_perniger_lanosus @@ -1929,30 +1939,31 @@ ./runBuild GCA_045781095.1_rPanTec1.hap1 vertebrate Pangshura_tecta ./runBuild GCA_045843765.1_mUroPar1.hap2 mammals Urocitellus_parryii ./runBuild GCA_045843805.1_mUroPar1.hap1 mammals Urocitellus_parryii ./runBuild GCA_046126795.1_rDibSmi1.hap1 vertebrate Dibamus_cf._smithi ./runBuild GCA_046126825.1_rDibSmi1.hap2 vertebrate Dibamus_cf._smithi ./runBuild GCA_046129645.1_bCyaCrs1.hap2 birds Cyanocitta_cristata ./runBuild GCA_046129655.1_bCyaCrs1.hap1 birds Cyanocitta_cristata ./runBuild GCA_046129695.1_bLonStr1.mat birds Lonchura_striata ./runBuild GCA_046129705.1_bLonStr1.pat birds Lonchura_striata ./runBuild GCA_046255685.1_fAmbSpe1.hap1 fish Amblyopsis_spelaea ./runBuild GCA_046255725.1_fAmbSpe1.hap2 fish Amblyopsis_spelaea ./runBuild GCA_046562875.1_mPanOnc1_haplotype_2 mammals Panthera_onca ./runBuild GCA_046562885.1_mPanOnc1_haplotype_1 mammals Panthera_onca ./runBuild GCA_046562895.1_mTriInu1_haplotype_2 mammals Trichechus_inunguis ./runBuild GCA_046562985.1_mTriInu1_haplotype_1 mammals Trichechus_inunguis +./runBuild GCA_047301625.1_ASM4730162v1 fish Choerodon_schoenleinii ./runBuild GCA_047511565.1_fPolLow2.hap1 fish Polymixia_lowei ./runBuild GCA_047511595.1_fPolLow2.hap2 fish Polymixia_lowei ./runBuild GCA_047511605.1_mCasCan1.hap2 mammals Castor_canadensis ./runBuild GCA_047511655.1_mCasCan1.hap1 mammals Castor_canadensis ./runBuild GCA_047511675.1_mMarFla1.hap1 mammals Marmota_flaviventris ./runBuild GCA_047512175.1_mMarFla1.hap2 mammals Marmota_flaviventris ./runBuild GCA_047715955.1_rBraPum1.hap2 vertebrate Bradypodion_pumilum ./runBuild GCA_047715975.1_rBraPum1.hap1 vertebrate Bradypodion_pumilum ./runBuild GCA_047774235.1_bZonAlb1.hap2 birds Zonotrichia_albicollis ./runBuild GCA_047830755.1_bZonAlb1.hap1 birds Zonotrichia_albicollis ./runBuild GCA_047922975.1_bEudEle1_v1.hap2 birds Eudromia_elegans ./runBuild GCA_047922985.1_bEudEle1_v1.hap1 birds Eudromia_elegans ./runBuild GCA_047948205.1_ASM4794820v1 invertebrate Lycorma_delicatula ./runBuild GCA_047948215.1_ASM4794821v1 invertebrate Lycorma_delicatula ./runBuild GCA_048126345.1_UniMelb_NotTyph_v1.0 mammals Notoryctes_typhlops @@ -1960,58 +1971,61 @@ ./runBuild GCA_048126745.1_DamDam1_v1.mat mammals Dama_dama ./runBuild GCA_048127045.1_DamDam1_v1.pat mammals Dama_dama ./runBuild GCA_048127205.1_SpiSpi1_v1.hap2 fish Spinachia_spinachia ./runBuild GCA_048128725.1_fSymNem1.1_haplotype_1 fish Symphorus_nematophorus ./runBuild GCA_048128805.1_fCenGer3.hap1.cur.20231027 fish Centroberyx_gerrardi ./runBuild GCA_048129025.1_fCaeTer1.1_haplotype_2 fish Caesio_teres ./runBuild GCA_048129055.1_fCaeTer1.1_haplotype_1 fish Caesio_teres ./runBuild GCA_048129065.1_fEpiMut1.hap2.cur.20240206 fish Epinephelus_rankini ./runBuild GCA_048129085.1_fCenGer3.hap2.cur.20231027 fish Centroberyx_gerrardi ./runBuild GCA_048129235.1_fEpiMut1.hap1.cur.20240206 fish Epinephelus_rankini ./runBuild GCA_048164845.1_mCanLup2.hap2 mammals Canis_lupus_baileyi ./runBuild GCA_048164855.1_mCanLup2.hap1 mammals Canis_lupus_baileyi ./runBuild GCA_048301445.1_SynTyp1_v1.hap1 fish Syngnathus_typhle ./runBuild GCA_048301465.1_ASM4830146v1 fish Aulostomus_maculatus ./runBuild GCA_048301475.1_ASM4830147v1 fish Aulostomus_maculatus +./runBuild GCA_048301585.1_ASM4830158v1 fish Rhinogobio_nasutus ./runBuild GCA_048301605.1_SynTyp1_v1.hap2 fish Syngnathus_typhle ./runBuild GCA_048537225.1_ASM4853722v1 fish Polymixia_cf._hollisterae ./runBuild GCA_048537235.1_ASM4853723v1 fish Polymixia_cf._hollisterae ./runBuild GCA_048544195.1_ASM4854419v1 fish Menidia_menidia ./runBuild GCA_048544215.1_fCoiMys1.hap1 fish Coilia_mystus ./runBuild GCA_048544225.1_fCoiMys1.hap2 fish Coilia_mystus ./runBuild GCA_048565335.1_aManAur1.hap2 vertebrate Mantella_aurantiaca ./runBuild GCA_048565345.1_aManAur1.hap1 vertebrate Mantella_aurantiaca ./runBuild GCA_048565385.1_mSaiBol1.pri primates Saimiri_boliviensis ./runBuild GCA_048569125.1_fDirArg3.hap1 fish Diretmus_argenteus ./runBuild GCA_048569135.1_fDirArg3.hap2 fish Diretmus_argenteus ./runBuild GCA_048569465.1_aAnoBae1.hap2 vertebrate Anomaloglossus_baeobatrachus ./runBuild GCA_048569485.1_aAnoBae1.hap1 vertebrate Anomaloglossus_baeobatrachus ./runBuild GCA_048593225.1_ASM4859322v1 mammals Sarcophilus_harrisii ./runBuild GCA_048593235.1_ASM4859323v1 mammals Sminthopsis_crassicaudata ./runBuild GCA_048593245.1_ASM4859324v1 mammals Dasyurus_maculatus ./runBuild GCA_048593285.1_ASM4859328v1 mammals Dasyurus_maculatus ./runBuild GCA_048593295.1_ASM4859329v1 mammals Sminthopsis_crassicaudata ./runBuild GCA_048593325.1_ASM4859332v1 mammals Sarcophilus_harrisii ./runBuild GCA_048593335.1_ASM4859333v1 mammals Notamacropus_eugenii ./runBuild GCA_048593345.1_ASM4859334v1 mammals Notamacropus_eugenii ./runBuild GCA_048628825.1_ASM4862882v1 fish Menidia_menidia ./runBuild GCA_048771865.1_mCteGun2.hap2 mammals Ctenodactylus_gundi ./runBuild GCA_048771875.1_mCteGun2.hap1 mammals Ctenodactylus_gundi ./runBuild GCA_048771995.1_bTaeGut7.mat birds Taeniopygia_guttata ./runBuild GCA_048772025.1_bTaeGut7.pat birds Taeniopygia_guttata ./runBuild GCA_048772815.1_mCalLat2.hap1 mammals Callospermophilus_lateralis ./runBuild GCA_048772825.1_mCalLat2.hap2 mammals Callospermophilus_lateralis +./runBuild GCA_049082045.1_fCriAus1.1_haplotype_2 fish Cristiceps_australis +./runBuild GCA_049082185.1_fCriAus1.1_haplotype_1 fish Cristiceps_australis ./runBuild GCA_900002395.1_PYYM01 invertebrate Plasmodium_yoelii ./runBuild GCA_900006655.3_Susie3 primates Gorilla_gorilla_gorilla ./runBuild GCA_900011295.1_ATCC19606_assembly bacteria Acinetobacter_baumannii ./runBuild GCA_900029915.1_F._proliferatum_NRRL62905_version_1 fungi Fusarium_proliferatum ./runBuild GCA_900036025.1_v1.0 invertebrate Lymnaea_stagnalis ./runBuild GCA_900044135.1_GZPH1RResV1 fungi Fusarium_graminearum ./runBuild GCA_900088365.1_Bl71nemr invertebrate Branchiostoma_lanceolatum ./runBuild GCA_900090025.2_PowCR01 invertebrate Plasmodium_ovale ./runBuild GCA_900090035.2_PocGH01 invertebrate Plasmodium_ovale ./runBuild GCA_900093555.2_GCA_900093555 invertebrate Plasmodium_vivax ./runBuild GCA_900094045.1_LASV_isolate_Alzey viral Mammarenavirus_lassaense ./runBuild GCA_900094665.2_CAROLI_EIJ_v1.1 mammals Mus_caroli ./runBuild GCA_900095595.1_PPRFG01 invertebrate Plasmodium_sp._gorilla_clade_G1 ./runBuild GCA_900097025.1_PRG01 invertebrate Plasmodium_reichenowi ./runBuild GCA_900097035.1_PBLACG01 invertebrate Plasmodium_sp._gorilla_clade_G3 @@ -2580,35 +2594,43 @@ ./runBuild GCA_965151615.1_bCygCol1.1 birds Cygnus_columbianus ./runBuild GCA_965152195.1_rNatDep2.hap2 vertebrate Natator_depressus ./runBuild GCA_965152275.1_rNatDep2.hap1 vertebrate Natator_depressus ./runBuild GCA_965152285.1_rEreImb1.hap2 vertebrate Eretmochelys_imbricata ./runBuild GCA_965153285.1_rPodTil1.hap1.1 vertebrate Podarcis_tiliguerta ./runBuild GCA_965153305.1_rPodTil1.hap2.1 vertebrate Podarcis_tiliguerta ./runBuild GCA_965178375.1_rPodLio1.hap2.1 vertebrate Podarcis_liolepis ./runBuild GCA_965178535.1_bColMon1.hap2.1 birds Coloeus_monedula ./runBuild GCA_965178545.1_bColMon1.hap1.1 birds Coloeus_monedula ./runBuild GCA_965183785.1_bPlaLeu2.hap2.1 birds Platalea_leucorodia ./runBuild GCA_965183815.1_bPlaLeu2.hap1.1 birds Platalea_leucorodia ./runBuild GCA_965194725.1_mBalBor1.hap2.1 mammals Balaenoptera_borealis ./runBuild GCA_965194765.1_mBalPhy2.hap2.1 mammals Balaenoptera_physalus ./runBuild GCA_965194805.1_mBalBor1.hap1.1 mammals Balaenoptera_borealis ./runBuild GCA_965194825.1_mBalPhy2.hap1.1 mammals Balaenoptera_physalus +./runBuild GCA_965202575.1_ktThaDemo2.hap2.1 invertebrate Thalia_democratica ./runBuild GCA_965202585.1_ktThaDemo2.hap1.1 invertebrate Thalia_democratica ./runBuild GCA_965203405.1_mPipPip2.hap1.1 mammals Pipistrellus_pipistrellus ./runBuild GCA_965204225.1_mPipPip2.hap2.1 mammals Pipistrellus_pipistrellus ./runBuild GCA_965207765.1_rZooViv2.hap1.1 vertebrate Zootoca_vivipara ./runBuild GCA_965208345.1_rZooViv2.hap2.1 vertebrate Zootoca_vivipara +./runBuild GCA_965225695.1_fPagPag1.hap2.1 fish Pagrus_pagrus +./runBuild GCA_965226115.1_fAulStu2.1 fish Aulonocara_stuartgranti +./runBuild GCA_965226575.1_fPagPag1.hap1.1 fish Pagrus_pagrus +./runBuild GCA_965231245.1_bZosLat1.hap2.1 birds Zosterops_lateralis +./runBuild GCA_965231255.1_bVanVan1.hap1.1 birds Vanellus_vanellus +./runBuild GCA_965231275.1_bZosLat1.hap1.1 birds Zosterops_lateralis +./runBuild GCA_965231335.1_bBraCan1.1 birds Branta_canadensis ./runBuild GCF_000001215.4_Release_6_plus_ISO1_MT invertebrate Drosophila_melanogaster ./runBuild GCF_000001405.39_GRCh38.p13 primates Homo_sapiens ./runBuild GCF_000001405.40_GRCh38.p14 primates Homo_sapiens ./runBuild GCF_000001635.26_GRCm38.p6 mammals Mus_musculus ./runBuild GCF_000001635.27_GRCm39 mammals Mus_musculus ./runBuild GCF_000001735.3_TAIR10 plants Arabidopsis_thaliana ./runBuild GCF_000001735.4_TAIR10.1 plants Arabidopsis_thaliana ./runBuild GCF_000001895.5_Rnor_6.0 mammals Rattus_norvegicus ./runBuild GCF_000001905.1_Loxafr3.0 mammals Loxodonta_africana ./runBuild GCF_000001985.1_JCVI-PMFA1-2.0 fungi Talaromyces_marneffei_ATCC_18224 ./runBuild GCF_000002035.6_GRCz11 fish Danio_rerio ./runBuild GCF_000002075.1_AplCal3.0 invertebrate Aplysia_californica ./runBuild GCF_000002235.5_Spur_5.0 invertebrate Strongylocentrotus_purpuratus ./runBuild GCF_000002265.2_Rn_Celera mammals Rattus_norvegicus ./runBuild GCF_000002285.3_CanFam3.1 mammals Canis_lupus @@ -5102,30 +5124,31 @@ ./runBuild GCF_029834395.1_SorFum_2.1 mammals Sorex_fumeus ./runBuild GCF_029851405.1_ASM2985140v1 fungi Lichtheimia_ornata ./runBuild GCF_029852145.1_iyMicMedi2.1 invertebrate Microplitis_mediator ./runBuild GCF_029867415.1_Vvil1.0 plants Vicia_villosa ./runBuild GCF_029873635.1_ASM2987363v1 plants Malania_oleifera ./runBuild GCF_029890125.1_OSU_Roscu_1.1 fish Rhinichthys_klamathensis_goyatoka ./runBuild GCF_029931775.1_rEulEur1.hap1 vertebrate Euleptes_europaea ./runBuild GCF_029955315.1_icCylForm1.1 invertebrate Cylas_formicarius ./runBuild GCF_029961685.1_dmAriCali1.0.hap1 plants Aristolochia_californica ./runBuild GCF_029962835.1_MsV1 plants Magnolia_sinica ./runBuild GCF_030014155.1_HZAU_Pvac_v1 fish Tachysurus_vachellii ./runBuild GCF_030014295.1_mLoxAfr1.hap2 mammals Loxodonta_africana ./runBuild GCF_030014385.1_fTriRos1.hap1 fish Trichomycterus_rosablanca ./runBuild GCF_030020395.1_mManPen7.hap1 mammals Manis_pentadactyla ./runBuild GCF_030028045.1_mHipAmp2.hap2 mammals Hippopotamus_amphibius_kiboko +./runBuild GCF_030028105.1_sMobBir1.hap1 vertebrate Mobula_birostris ./runBuild GCF_030028575.1_MMel_1.1 birds Malurus_melanocephalus ./runBuild GCF_030035675.1_rRhiFlo1.hap2 vertebrate Rhineura_floridana ./runBuild GCF_030052815.1_ASM3005281v1 plants Hevea_brasiliensis ./runBuild GCF_030144855.1_sHypSab1.hap1 vertebrate Hypanus_sabinus ./runBuild GCF_030179895.1_DkikHiC1v2 invertebrate Drosophila_kikkawai ./runBuild GCF_030179905.1_DbipHiC1v2 invertebrate Drosophila_bipectinata ./runBuild GCF_030179915.1_DtakHiC1v2 invertebrate Drosophila_takahashii ./runBuild GCF_030222135.1_86718_ANA_hifiasm-v0.15.2.pri primates Aotus_nancymaae ./runBuild GCF_030247185.1_Malgen_1.1 invertebrate Malaya_genurostris ./runBuild GCF_030247195.1_ASM3024719v1 invertebrate Topomyia_yanbarensis ./runBuild GCF_030253575.1_ASM3025357v1 plants Rhododendron_vialii ./runBuild GCF_030254825.1_Bangor_MerUng_6.1 mammals Meriones_unguiculatus ./runBuild GCF_030265055.1_RoL_Dexc_1.0 fish Doryrhamphus_excisus ./runBuild GCF_030265065.1_ASM3026506v1 fish Corythoichthys_intestinalis ./runBuild GCF_030269925.1_ASM3026992v2 invertebrate Bombyx_mori @@ -5366,30 +5389,31 @@ ./runBuild GCF_043159975.1_mMacNem.hap1 primates Macaca_nemestrina ./runBuild GCF_043229965.1_CBGP_Dsuzu_IsoJpt1.0 invertebrate Drosophila_suzukii ./runBuild GCF_043380555.1_NfurGRZ-RIMD1 fish Nothobranchius_furzeri ./runBuild GCF_043381705.1_CAS_Ptep_4.0 invertebrate Parasteatoda_tepidariorum ./runBuild GCF_043641665.1_fEnoArm2.hap1 fish Enoplosus_armatus ./runBuild GCF_044049435.1_Asppdef1 fungi Aspergillus_pseudodeflectus ./runBuild GCF_044049455.1_Aspluc1 fungi Aspergillus_lucknowensis ./runBuild GCF_044167205.1_ASM4416720v1 fungi Ceratocystis_lukuohia ./runBuild GCF_044704955.1_sPriJap1.hap1 vertebrate Pristiophorus_japonicus ./runBuild GCF_045282275.1_CBM3 fungi Nakaseomyces_bracarensis ./runBuild GCF_045679555.1_SLU_Salpinus.1 fish Salvelinus_alpinus ./runBuild GCF_045791955.1_UVic_Ocla_1.0 fish Oncorhynchus_clarkii_lewisi ./runBuild GCF_045866475.1_ASM4586647v1 fungi Madurella_fahalii ./runBuild GCF_046630095.1_CSIRO_AGI_Tana_v1 fish Trachinotus_anak ./runBuild GCF_047511675.1_mMarFla1.hap1 mammals Marmota_flaviventris +./runBuild GCF_048164855.1_mCanLup2.hap1 mammals Canis_lupus_baileyi ./runBuild GCF_900000015.1_Plasmopara_halstedii_genome invertebrate Plasmopara_halstedii ./runBuild GCF_900002335.3_GCA_900002335 invertebrate Plasmodium_chabaudi_chabaudi ./runBuild GCF_900002375.2_GCA_900002375 invertebrate Plasmodium_berghei_ANKA ./runBuild GCF_900002385.2_GCA_900002385 invertebrate Plasmodium_yoelii ./runBuild GCF_900005765.1_PRELSG invertebrate Plasmodium_relictum ./runBuild GCF_900005855.1_PGAL8A invertebrate Plasmodium_gallinaceum ./runBuild GCF_900007245.1_AQF_AC_PRJEB9495_v1 fungi Priceomyces_carsonii ./runBuild GCF_900007375.1_ASM90000737v1 fungi Fusarium_venenatum ./runBuild GCF_900044065.1_Genome_assembly_version_1 fungi Fusarium_mangiferae ./runBuild GCF_900067095.1_F._proliferatum_ET1_version_1 fungi Fusarium_proliferatum_ET1 ./runBuild GCF_900067755.1_pvi1.1 vertebrate Pogona_vitticeps ./runBuild GCF_900074925.1_version_1 fungi Ramularia_collo-cygni ./runBuild GCF_900079805.1_Fusarium_fujikuroi_IMI58289_V2 fungi Fusarium_fujikuroi_IMI_58289 ./runBuild GCF_900080235.1_BallGen_V1 fish Labrus_bergylta ./runBuild GCF_900090045.1_PmUG01 bacteria Plasmodium_malariae