e4408769134157e7443af0059351f2f562a95a41 hiram Sun Jul 6 13:17:02 2025 -0700 adding several per user request refs #29545 diff --git src/hg/makeDb/doc/asmHubs/master.run.list src/hg/makeDb/doc/asmHubs/master.run.list index f746d78ec5d..bde65159b59 100644 --- src/hg/makeDb/doc/asmHubs/master.run.list +++ src/hg/makeDb/doc/asmHubs/master.run.list @@ -1080,30 +1080,31 @@ ./runBuild GCA_015832245.1_ASM1583224v1 fungi Nosema_granulosis ./runBuild GCA_015832495.2_NRM_Aalces_2_0.fsa mammals Alces_alces ./runBuild GCA_015852515.1_mTacAcu1.alt mammals Tachyglossus_aculeatus ./runBuild GCA_015852565.1_bf_hap-2 invertebrate Branchiostoma_floridae_x_Branchiostoma_japonicum ./runBuild GCA_016097395.1_Ncaninum_LIV invertebrate Neospora_caninum ./runBuild GCA_016128335.1_ZJU1.0 birds Dromaius_novaehollandiae ./runBuild GCA_016128335.2_ZJU2.0 birds Dromaius_novaehollandiae ./runBuild GCA_016165845.1_Cannbio-2 plants Cannabis_sativa ./runBuild GCA_016255985.1_ASM1625598v1 fungi Dictyocoela_roeselum ./runBuild GCA_016256075.1_ASM1625607v1 fungi Dictyocoela_muelleri ./runBuild GCA_016413745.1_ASM1641374v1 bacteria Bacillus_mojavensis ./runBuild GCA_016413885.1_Elo_Vpla-B_alternate_1.0 plants Vanilla_planifolia ./runBuild GCA_016413895.1_Elo_Vpla-A_principal_1.0 plants Vanilla_planifolia ./runBuild GCA_016432865.1_AdamAnt mammals Antechinus_flavipes ./runBuild GCA_016617965.1_ASM1661796v1 invertebrate Macrosiphum_rosae +./runBuild GCA_016618085.1_ASM1661808v1 invertebrate Neovahlkampfia_damariscottae ./runBuild GCA_016618375.1_Pcap_4.1 invertebrate Phytophthora_capsici ./runBuild GCA_016647715.1_ASM1664771v1 birds Pavo_muticus ./runBuild GCA_016695395.2_mHomSap3.mat primates Homo_sapiens ./runBuild GCA_016700215.2_bGalGal1.pat.whiteleghornlayer.GRCg7w_WZ birds Gallus_gallus ./runBuild GCA_016700455.2_mHomSap3.pat primates Homo_sapiens ./runBuild GCA_016772295.1_ASM1677229v1 fungi Coprinopsis_cinerea_AmutBmut_pab1-1 ./runBuild GCA_016801405.1_ASM1680140v1 fungi Parastagonospora_nodorum_SN15 ./runBuild GCA_016880875.1_bAcaChl1.alt birds Acanthisitta_chloris ./runBuild GCA_016904835.1_bAcaChl1.pri birds Acanthisitta_chloris ./runBuild GCA_016906325.1_ASM1690632v1 fungi Monilinia_fructicola ./runBuild GCA_016920875.1_Utah_Ccol_1.0 invertebrate Columbicola_columbae ./runBuild GCA_017140985.1_hormaphis_cornu_26Sep2017_PoQx8 invertebrate Hormaphis_cornu ./runBuild GCA_017301755.1_ASM1730175v1 fungi Pneumocystis_wakefieldiae ./runBuild GCA_017310585.1_ASM1731058v1 fungi Histoplasma_capsulatum ./runBuild GCA_017310615.1_ASM1731061v1 fungi Histoplasma_capsulatum_var._duboisii_H88 @@ -2028,30 +2029,31 @@ ./runBuild GCA_041900085.1_HG02056_pat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900105.1_HG02015_mat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900115.1_HG03834_mat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900135.1_HG02258_mat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900145.1_HG01192_pat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900165.1_HG02015_pat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900235.1_HG01261_pat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900245.1_HG00408_mat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900255.1_HG00408_pat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900265.1_HG00597_mat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900275.1_HG01192_mat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900365.1_HG00597_pat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041900385.1_HG02129_mat_hprc_rel2 primates Homo_sapiens ./runBuild GCA_041902795.1_ASM4190279v1 fish Electrophorus_electricus ./runBuild GCA_041903045.1_ASM4190304v1 fish Epinephelus_lanceolatus +./runBuild GCA_041937235.1_ASM4193723v1 invertebrate Willaertia_magna ./runBuild GCA_042026455.1_HG02293_mat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042026465.1_HG02280_mat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042026475.1_HG02451_mat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042026525.1_HG01099_mat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042026535.1_HG03704_mat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027065.1_HG01981_mat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027095.1_HG00609_mat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027105.1_HG02004_mat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027135.1_HG02451_pat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027145.1_HG01496_mat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027445.1_HG03704_pat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027455.1_HG02004_pat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027475.1_HG01099_pat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027485.1_HG02280_pat_hprc_f2 primates Homo_sapiens ./runBuild GCA_042027495.1_HG02293_pat_hprc_f2 primates Homo_sapiens @@ -3397,30 +3399,31 @@ ./runBuild GCF_000185945.1_ASM18594v1 fungi Cryptococcus_gattii_WM276 ./runBuild GCF_000186305.1_Python_molurus_bivittatus-5.0.2 vertebrate Python_bivittatus ./runBuild GCF_000186865.1_v_1.0 invertebrate Aureococcus_anophagefferens ./runBuild GCF_000187245.1_Hansenula_2 fungi Ogataea_parapolymorpha_DL-1 ./runBuild GCF_000187405.1_MetAcr_May2010 fungi Metarhizium_acridum_CQMa_102 ./runBuild GCF_000187425.2_MAA_2.0 fungi Metarhizium_robertsii_ARSEF_23 ./runBuild GCF_000187915.1_Pbar_UMD_V03 invertebrate Pogonomyrmex_barbatus ./runBuild GCF_000188075.2_Si_gnH invertebrate Solenopsis_invicta ./runBuild GCF_000188095.3_BIMP_2.2 invertebrate Bombus_impatiens ./runBuild GCF_000188115.4_SL3.0 plants Solanum_lycopersicum ./runBuild GCF_000188115.5_SL3.1 plants Solanum_lycopersicum ./runBuild GCF_000189315.1_Devil_ref_v7.0 mammals Sarcophilus_harrisii ./runBuild GCF_000189635.1_JCVI-TTA1-2.2 invertebrate Tetrahymena_thermophila_SB210 ./runBuild GCF_000190715.1_v1.0 invertebrate Dictyostelium_purpureum ./runBuild GCF_000192795.1_Vavr_culi_floridensis_V1 fungi Vavraia_culicis_subsp._floridensis +./runBuild GCF_000195855.1_ASM19585v1 bacteria Mycobacterium_leprae_TN ./runBuild GCF_000195955.2_ASM19595v2 bacteria Mycobacterium_tuberculosis_H37Rv ./runBuild GCF_000196035.1_ASM19603v1 bacteria Listeria_monocytogenes_EGD-e ./runBuild GCF_000196095.1_ASM19609v1 bacteria Vibrio_parahaemolyticus_RIMD_2210633 ./runBuild GCF_000196175.1_ASM19617v1 bacteria Bdellovibrio_bacteriovorus_HD1002004-02-10 ./runBuild GCF_000203795.1_v1.0 fungi Batrachochytrium_dendrobatidis_JAM81 ./runBuild GCF_000203795.2_v1.1 fungi Batrachochytrium_dendrobatidis_JAM81 ./runBuild GCF_000203815.1_DFas_2.0 invertebrate Cavenderia_fasciculata ./runBuild GCF_000204055.1_v1.0 fungi Melampsora_larici-populina_98AG31 ./runBuild GCF_000204255.1_ASM20425v1 bacteria Chlamydia_psittaci_6BC ./runBuild GCF_000204515.1_Aech_3.9 invertebrate Acromyrmex_echinatior ./runBuild GCF_000208615.1_JCVI_ISG_i3_1.0 invertebrate Ixodes_scapularis ./runBuild GCF_000208655.1_Dasnov3.0 mammals Dasypus_novemcinctus ./runBuild GCF_000208655.3_Dasnov3.2 mammals Dasypus_novemcinctus ./runBuild GCF_000208745.1_Criollo_cocoa_genome_V2 plants Theobroma_cacao ./runBuild GCF_000208865.1_ASM20886v2 invertebrate Neospora_caninum_Liverpool @@ -3598,30 +3601,31 @@ ./runBuild GCF_000330505.1_EIA2_v2 invertebrate Entamoeba_invadens_IP1 ./runBuild GCF_000331085.3_ASM33108v2 bacteria Mycoplasma_pneumoniae_M129-B7 ./runBuild GCF_000331145.1_ASM33114v1 plants Cicer_arietinum ./runBuild GCF_000331425.1_PseHum1.0 birds Pseudopodoces_humilis ./runBuild GCF_000331955.2_Oorc_1.1 mammals Orcinus_orca ./runBuild GCF_000332495.1_gls454203v02 bacteria Leptospira_terpstrae_serovar_Hualin_str._LT_11-33__ATCC_700639 ./runBuild GCF_000332515.2_gls454195v02 bacteria Leptospira_wolbachii_serovar_Codice_str._CDC ./runBuild GCF_000334435.1_CloSac1.0 bacteria Clostridium_saccharoperbutylacetonicum_N1-4HMt ./runBuild GCF_000334495.1_TupChi_1.0 mammals Tupaia_chinensis ./runBuild GCF_000337935.1_Cliv_1.0 birds Columba_livia ./runBuild GCF_000337955.1_F_peregrinus_v1.0 birds Falco_peregrinus ./runBuild GCF_000337975.1_F_cherrug_v1.0 birds Falco_cherrug ./runBuild GCF_000338955.1_Bauco1 fungi Baudoinia_panamericana_UAMH_10762 ./runBuild GCF_000338995.1_Cocsa1 fungi Bipolaris_sorokiniana_ND90Pr ./runBuild GCF_000340215.1_Mycfi2 fungi Pseudocercospora_fijiensis_CIRAD86 +./runBuild GCF_000340435.2_ASM34043v3 bacteria Mycobacterium_haemophilum_DSM_44634 ./runBuild GCF_000340665.1_C.cajan_V1.0 plants Cajanus_cajan ./runBuild GCF_000340665.2_C.cajan_V1.1 plants Cajanus_cajan ./runBuild GCF_000341935.1_Ccin1 invertebrate Cephus_cinctus ./runBuild GCF_000341935.2_Ccin1v2 invertebrate Cephus_cinctus ./runBuild GCF_000342415.1_JCVI-bewag-v1.1 invertebrate Theileria_equi_strain_WA ./runBuild GCF_000344095.2_Aros_2.0 invertebrate Athalia_rosae ./runBuild GCF_000344595.1_CheMyd_1.0 vertebrate Chelonia_mydas ./runBuild GCF_000344685.1_Glotr1_1 fungi Gloeophyllum_trabeum_ATCC_11539 ./runBuild GCF_000346465.2_Prunus_persica_NCBIv2 plants Prunus_persica ./runBuild GCF_000346735.1_P.mume_V1.0 plants Prunus_mume ./runBuild GCF_000347175.1_gls454194v01 bacteria Leptospira_alstonii_serovar_Sichuan_str._79601 ./runBuild GCF_000347755.3_Ccap_2.1 invertebrate Ceratitis_capitata ./runBuild GCF_000348985.1_ASM34898v1 fungi Kazachstania_naganishii_CBS_8797 ./runBuild GCF_000349005.2_Pneumo_murina_B123_V4 fungi Pneumocystis_murina_B123 ./runBuild GCF_000349305.1_ASM34930v2 fungi Malassezia_sympodialis_ATCC_42132