633cc56e1b1043b0ab6e1fd0e9b90154e2c03c0c hiram Mon Apr 20 13:00:51 2026 -0700 document procedure for import of VGP 577-way maf result refs #34370 diff --git src/hg/makeDb/doc/vgp577way/mkIRowsJL.sh src/hg/makeDb/doc/vgp577way/mkIRowsJL.sh new file mode 100755 index 00000000000..e996e22e716 --- /dev/null +++ src/hg/makeDb/doc/vgp577way/mkIRowsJL.sh @@ -0,0 +1,17 @@ +#!/bin/bash + +if [ $# != 1 ]; then + printf "usage: mkIRowsJL.sh > jobList\n" 1>&2 + exit 255 +fi + +export twoBit="${1}" +if [ ! -s "${twoBit}" ]; then + printf "ERROR: can not find the given twoBit file:\n%s\n" "${twoBit}" 1>&2 +fi + +for M in `shuf maf.list` +do + chrMaf=`basename "${M}"` + printf "mafAddIRowsStream -nBeds=nBeds ${M} ${twoBit} result/${chrMaf}\n" +done