1c0a16d8c4d5ad60b5bd5f0fe6470bdd4c5f3f58 hiram Wed Sep 23 16:26:39 2026 -0700 chainNet trackDb for hg38 GCA_040939475.2, otto liftOver diff --git src/hg/makeDb/trackDb/human/hg38/hg38.GCA_040939475.2.chainNet.ra src/hg/makeDb/trackDb/human/hg38/hg38.GCA_040939475.2.chainNet.ra new file mode 100644 index 00000000000..1bd05f50dc0 --- /dev/null +++ src/hg/makeDb/trackDb/human/hg38/hg38.GCA_040939475.2.chainNet.ra @@ -0,0 +1,49 @@ +############################################################################## +# GCA_040939475.2 - gray mouse lemur (pat1 Inina 2025) - Microcebus murinus - taxId: 30608 +############################################################################## +track chainNetGCA_040939475.2 +compositeTrack on +shortLabel gray mouse lemur (pat1 Inina 2025) Chain/Net +longLabel gray mouse lemur (pat1 Inina 2025) (Jun. 2025 GCA_040939475.2_M.murinus_Inina_pat1.0), Chain and Net Alignments +subGroup1 view Views chain=Chain net=Net +dragAndDrop subTracks +visibility hide +group compGeno +noInherit on +priority 100.1 +color 0,0,0 +altColor 100,50,0 +type bed 3 +sortOrder view=+ +matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91 +chainMinScore 3000 +chainLinearGap medium +matrixHeader A, C, G, T +otherDb GCA_040939475.2 +html chainNet + + track chainNetGCA_040939475.2Viewchain + shortLabel Chain + view chain + visibility pack + parent chainNetGCA_040939475.2 + spectrum on + + track chainGCA_040939475.2 + parent chainNetGCA_040939475.2Viewchain + subGroups view=chain + shortLabel gray mouse lemur (pat1 Inina 2025) Chain + longLabel gray mouse lemur (pat1 Inina 2025) (Jun. 2025 GCA_040939475.2_M.murinus_Inina_pat1.0) Chained Alignments + type bigChain GCA_040939475.2 + bigDataUrl /gbdb/$D/chainNet/$D.chainGCA_040939475.2.bb + linkDataUrl /gbdb/$D/chainNet/$D.chainGCA_040939475.2Link.bb + + track chainLiftOverGCA_040939475.2 + parent chainNetGCA_040939475.2Viewchain + subGroups view=chain + shortLabel gray mouse lemur (pat1 Inina 2025) liftOverChain + longLabel gray mouse lemur (pat1 Inina 2025) (Jun. 2025 GCA_040939475.2_M.murinus_Inina_pat1.0) Lift Over Chained Alignments + type bigChain GCA_040939475.2 + bigDataUrl /gbdb/$D/chainNet/$D.chainLiftOverGCA_040939475.2.bb + linkDataUrl /gbdb/$D/chainNet/$D.chainLiftOverGCA_040939475.2Link.bb +