ad6dd2177ad20bea9e32563ee76a1c598bccb6d5
hiram
  Tue Sep 29 23:22:17 2026 -0700
adding hg38 liftOver chain from lastz refs #34360

diff --git src/hg/makeDb/trackDb/human/hs1/humanChainNet.trackDb.ra src/hg/makeDb/trackDb/human/hs1/humanChainNet.trackDb.ra
index 60c2acd837d..d060839988a 100644
--- src/hg/makeDb/trackDb/human/hs1/humanChainNet.trackDb.ra
+++ src/hg/makeDb/trackDb/human/hs1/humanChainNet.trackDb.ra
@@ -192,41 +192,31 @@
         html html/GCA_009914755.4_T2T-CHM13v2.0.chainNet
         priority 14
 
         track chainRBestHg38
         subTrack GCA_009914755.4_T2T-CHM13v2.0ChainNetViewchain off
         subGroups view=chain species=s003 clade=c00
         shortLabel hg38 rbChain
         longLabel hg38 (Dec. 2013) Reciprocal Best Chained Alignments
         type bigChain hg38
         bigDataUrl  /gbdb/hs1/bbi/chainRBestHg38.bb
         linkDataUrl  /gbdb/hs1/bbi/chainRBestHg38Link.bb
         otherDb hg38
         html html/GCA_009914755.4_T2T-CHM13v2.0.chainNet
         priority 15
 
-        #track chainLiftOverHg38
-        #subTrack GCA_009914755.4_T2T-CHM13v2.0ChainNetViewchain on
-        #subGroups view=chain species=s003 clade=c00
-        #shortLabel hg38 loChain
-        #longLabel hg38 (Dec. 2013) Lift Over Chained Alignments
-        #type bigChain hg38
-        #bigDataUrl  /gbdb/hs1/bbi/chainLiftOverHg38.bb
-        #linkDataUrl  /gbdb/hs1/bbi/chainLiftOverHg38Link.bb
-        #otherDb hg38
-        #html html/GCA_009914755.4_T2T-CHM13v2.0.chainNet
-        #priority 16
+        include chainLiftOverHg38.ra alpha
 
     track GCA_009914755.4_T2T-CHM13v2.0MafNetViewnet
     shortLabel Nets
     view net
     visibility hide
     subTrack GCA_009914755.4_T2T-CHM13v2.0ChainNet
 
         track netGCA_021950905.1
         parent GCA_009914755.4_T2T-CHM13v2.0MafNetViewnet
         subGroups view=net species=s000 clade=c00
         shortLabel HG002 pat Net
         longLabel HG002 pat GCA_021950905.1_HG002.pat.cur.20211005 (2022-02-04) Net Alignment
         type bigMaf
         bigDataUrl  /gbdb/hs1/bbi/GCA_021950905.1.net.bb
         summary /gbdb/hs1/bbi/GCA_021950905.1.net.summary.bb