a8cddaa41b8aba592873f48a24b15229c052bfbd hiram Tue Sep 22 05:08:06 2026 -0700 chainNet trackDb for danRer11 GCF_049306965.2, otto liftOver diff --git src/hg/makeDb/trackDb/zebrafish/danRer11/danRer11.GCF_049306965.2.chainNet.ra src/hg/makeDb/trackDb/zebrafish/danRer11/danRer11.GCF_049306965.2.chainNet.ra new file mode 100644 index 00000000000..1a3ccf66507 --- /dev/null +++ src/hg/makeDb/trackDb/zebrafish/danRer11/danRer11.GCF_049306965.2.chainNet.ra @@ -0,0 +1,49 @@ +############################################################################## +# GCF_049306965.2 - zebrafish (Tuebingen 2025) - Danio rerio - taxId: 7955 +############################################################################## +track chainNetGCF_049306965.2 +compositeTrack on +shortLabel zebrafish (Tuebingen 2025) Chain/Net +longLabel zebrafish (Tuebingen 2025) (Apr. 2025 GCF_049306965.2_GRCz12tu), Chain and Net Alignments +subGroup1 view Views chain=Chain net=Net +dragAndDrop subTracks +visibility hide +group compGeno +noInherit on +priority 100.1 +color 0,0,0 +altColor 100,50,0 +type bed 3 +sortOrder view=+ +matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91 +chainMinScore 3000 +chainLinearGap medium +matrixHeader A, C, G, T +otherDb GCF_049306965.2 +html chainNet + + track chainNetGCF_049306965.2Viewchain + shortLabel Chain + view chain + visibility pack + parent chainNetGCF_049306965.2 + spectrum on + + track chainGCF_049306965.2 + parent chainNetGCF_049306965.2Viewchain + subGroups view=chain + shortLabel zebrafish (Tuebingen 2025) Chain + longLabel zebrafish (Tuebingen 2025) (Apr. 2025 GCF_049306965.2_GRCz12tu) Chained Alignments + type bigChain GCF_049306965.2 + bigDataUrl /gbdb/$D/chainNet/$D.chainGCF_049306965.2.bb + linkDataUrl /gbdb/$D/chainNet/$D.chainGCF_049306965.2Link.bb + + track chainLiftOverGCF_049306965.2 + parent chainNetGCF_049306965.2Viewchain + subGroups view=chain + shortLabel zebrafish (Tuebingen 2025) liftOverChain + longLabel zebrafish (Tuebingen 2025) (Apr. 2025 GCF_049306965.2_GRCz12tu) Lift Over Chained Alignments + type bigChain GCF_049306965.2 + bigDataUrl /gbdb/$D/chainNet/$D.chainLiftOverGCF_049306965.2.bb + linkDataUrl /gbdb/$D/chainNet/$D.chainLiftOverGCF_049306965.2Link.bb +