ad6dd2177ad20bea9e32563ee76a1c598bccb6d5 hiram Tue Sep 29 23:22:17 2026 -0700 adding hg38 liftOver chain from lastz refs #34360 diff --git src/hg/makeDb/trackDb/human/hs1/miniMapChains.ra src/hg/makeDb/trackDb/human/hs1/miniMapChains.ra index 38f6e90b59d..10e5fe359d0 100644 --- src/hg/makeDb/trackDb/human/hs1/miniMapChains.ra +++ src/hg/makeDb/trackDb/human/hs1/miniMapChains.ra @@ -1,52 +1,52 @@ ############################################################################## # hg38 - human (GRCh38/hg38) ############################################################################## track chainNetMiniMap2Hg38 compositeTrack on shortLabel miniMap2 Chain/Net longLabel minimap2 Chain and Lift Over Alignments subGroup1 view Views chain=Chain liftover=LiftOver dragAndDrop subTracks visibility hide group compGeno priority 100.1 color 0,0,0 altColor 100,50,0 type bed 3 sortOrder view=+ otherDb hg38 html html/GCA_020740595.1_mLemCat1.alt.miniMap2ChainNet track chainNetMiniMap2Hg38Viewchain shortLabel Chain view chain visibility pack parent chainNetMiniMap2Hg38 spectrum on track chainMiniMap2Hg38 parent chainNetMiniMap2Hg38Viewchain subGroups view=chain - shortLabel human/GRCh38/hg38 mm2 Chain + shortLabel hg38 mm2 Chain longLabel human/GRCh38/hg38 minimap2 Chained Alignments type bigChain hg38 bigDataUrl /gbdb/hs1/chainNet/hs1.chainMiniMap2Hg38.bb linkDataUrl /gbdb/hs1/chainNet/hs1.chainMiniMap2Hg38Link.bb priority 1 track chainNetMiniMap2Hg38ViewLiftOver shortLabel Lift Over view liftover visibility hide parent chainNetMiniMap2Hg38 spectrum on track chainLiftOverMiniMap2Hg38 parent chainNetMiniMap2Hg38ViewLiftOver subGroups view=liftover - shortLabel human (GRCh38/hg38) mm2 loChain + shortLabel hg38 mm2 loChain longLabel human (GRCh38/hg38) minimap2 Lift Over Chained Alignments type bigChain hg38 bigDataUrl /gbdb/hs1/chainNet/hs1.chainLiftOverMiniMap2Hg38.bb linkDataUrl /gbdb/hs1/chainNet/hs1.chainLiftOverMiniMap2Hg38Link.bb priority 2