efaa2288304bd000222111bb024c336d8c56929a hiram Tue Sep 22 03:35:40 2026 -0700 chainNet trackDb for danRer11 GCF_052040795.1, otto liftOver diff --git src/hg/makeDb/trackDb/zebrafish/danRer11/danRer11.GCF_052040795.1.chainNet.ra src/hg/makeDb/trackDb/zebrafish/danRer11/danRer11.GCF_052040795.1.chainNet.ra new file mode 100644 index 00000000000..5a2a49f9206 --- /dev/null +++ src/hg/makeDb/trackDb/zebrafish/danRer11/danRer11.GCF_052040795.1.chainNet.ra @@ -0,0 +1,49 @@ +############################################################################## +# GCF_052040795.1 - zebrafish (GRCZ12ab M-AB 2025 refseq) - Danio rerio - taxId: 7955 +############################################################################## +track chainNetGCF_052040795.1 +compositeTrack on +shortLabel zebrafish (GRCZ12ab M-AB 2025 refseq) Chain/Net +longLabel zebrafish (GRCZ12ab M-AB 2025 refseq) (Aug. 2025 GCF_052040795.1_GRCz12ab), Chain and Net Alignments +subGroup1 view Views chain=Chain net=Net +dragAndDrop subTracks +visibility hide +group compGeno +noInherit on +priority 100.1 +color 0,0,0 +altColor 100,50,0 +type bed 3 +sortOrder view=+ +matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91 +chainMinScore 3000 +chainLinearGap medium +matrixHeader A, C, G, T +otherDb GCF_052040795.1 +html chainNet + + track chainNetGCF_052040795.1Viewchain + shortLabel Chain + view chain + visibility pack + parent chainNetGCF_052040795.1 + spectrum on + + track chainGCF_052040795.1 + parent chainNetGCF_052040795.1Viewchain + subGroups view=chain + shortLabel zebrafish (GRCZ12ab M-AB 2025 refseq) Chain + longLabel zebrafish (GRCZ12ab M-AB 2025 refseq) (Aug. 2025 GCF_052040795.1_GRCz12ab) Chained Alignments + type bigChain GCF_052040795.1 + bigDataUrl /gbdb/$D/chainNet/$D.chainGCF_052040795.1.bb + linkDataUrl /gbdb/$D/chainNet/$D.chainGCF_052040795.1Link.bb + + track chainLiftOverGCF_052040795.1 + parent chainNetGCF_052040795.1Viewchain + subGroups view=chain + shortLabel zebrafish (GRCZ12ab M-AB 2025 refseq) liftOverChain + longLabel zebrafish (GRCZ12ab M-AB 2025 refseq) (Aug. 2025 GCF_052040795.1_GRCz12ab) Lift Over Chained Alignments + type bigChain GCF_052040795.1 + bigDataUrl /gbdb/$D/chainNet/$D.chainLiftOverGCF_052040795.1.bb + linkDataUrl /gbdb/$D/chainNet/$D.chainLiftOverGCF_052040795.1Link.bb +